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MELO3C026070 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C026070
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionthioredoxin-like protein HCF164, chloroplastic isoform X1
Genome locationchr12:14672927..14674090
RNA-Seq ExpressionMELO3C026070
SyntenyMELO3C026070
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016671 - oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily
IPR044241 - Thiol:disulfide interchange protein TxlA/HCF164


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12934.1 thioredoxin-like protein [Cucumis melo var. makuwa]5.6e-4571.15Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVEFYADW
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L         K   VEFYADW
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVEFYADW

Query:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        CEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

XP_008440187.2 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucumis melo]2.8e-4468.52Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

XP_008440188.2 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucumis melo]5.6e-4571.15Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVEFYADW
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L         K   VEFYADW
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVEFYADW

Query:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        CEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

XP_016899239.1 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucumis melo]2.8e-4468.52Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

XP_016899240.1 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X4 [Cucumis melo]2.8e-4468.52Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

TrEMBL top hitse value%identityAlignment
A0A1S3B047 thioredoxin-like protein HCF164, chloroplastic isoform X31.3e-4468.52Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

A0A1S3B0J9 thioredoxin-like protein HCF164, chloroplastic isoform X22.7e-4571.15Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVEFYADW
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L         K   VEFYADW
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVEFYADW

Query:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        CEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

A0A1S4DTC4 thioredoxin-like protein HCF164, chloroplastic isoform X11.3e-4468.52Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

A0A1S4DU52 thioredoxin-like protein HCF164, chloroplastic isoform X41.3e-4468.52Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

A0A5D3CPH8 Thioredoxin-like protein2.7e-4571.15Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVEFYADW
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSS+  D   S  D  +  L         K   VEFYADW
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVEFYADW

Query:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK
        CEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K
Subjt:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTK

SwissProt top hitse value%identityAlignment
O23166 Thioredoxin-like protein HCF164, chloroplastic2.2e-2850Show/hide
Query:  PESHDT------IFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVE
        PES +T      I   E SS   E    +    +SSSS+ GF + PNKDI RR+A ++ ++ L+LF ST  D   S  D  +  L         K   VE
Subjt:  PESHDT------IFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVE

Query:  FYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTKD
        FYADWCEVC ELAPD YK+EQQ+   D VNFVMLNVDNTKWEQELDEFGVEG    +FL ++
Subjt:  FYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTKD

P35088 Thiol:disulfide interchange protein TxlA3.1e-0642.59Show/hide
Query:  VEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEG
        +EFYADWC  C  +A     ++Q +   D ++FVMLN+DN KW  E+ ++ V+G
Subjt:  VEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEG

P73920 Thiol:disulfide interchange protein TxlA homolog2.2e-0748.15Show/hide
Query:  VEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEG
        VEFYADWC  C  +APD  ++++ +     VNF MLNVDN KW  E+  + V+G
Subjt:  VEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEG

Q7Y0D4 Thioredoxin-like protein HCF164, chloroplastic2.2e-2849.67Show/hide
Query:  EKSSDGPESADDTI---GQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFS-------------STDDENSYDDSGSFKLKAHYVEFYADWCEVCME
        E  +D P + DD+     +A+S+S + G   FPNKD+ RRIA+ ST+  + LF+                +   Y+++ S   K   VEFYADWCEVC E
Subjt:  EKSSDGPESADDTI---GQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFS-------------STDDENSYDDSGSFKLKAHYVEFYADWCEVCME

Query:  LAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTKD
        LAPD YKVEQQ+   D VNFVMLNVDNTKWEQELDEFGVEG    +FL K+
Subjt:  LAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTKD

Arabidopsis top hitse value%identityAlignment
AT4G37200.1 Thioredoxin superfamily protein1.6e-2950Show/hide
Query:  PESHDT------IFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVE
        PES +T      I   E SS   E    +    +SSSS+ GF + PNKDI RR+A ++ ++ L+LF ST  D   S  D  +  L         K   VE
Subjt:  PESHDT------IFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSST--DDENSYDDSGSFKL---------KAHYVE

Query:  FYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTKD
        FYADWCEVC ELAPD YK+EQQ+   D VNFVMLNVDNTKWEQELDEFGVEG    +FL ++
Subjt:  FYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCCGAATCGCACGACACCATCTTTGCTCCGGAAAAATCATCGGACGGTCCTGAATCAGCCGATGACACCATTGGCCAAGCCGCTAGTTCTTCAAGTAAT
CAAGGTTTTCTTCAGTTTCCCAATAAAGATATCATTAGACGAATTGCAATCATTTCTACTGTTTCGGAACTGGCACTTTTCTCCTCAACTGATGATGAAAATTCA
TATGATGATTCAGGCTCTTTCAAATTGAAAGCTCACTATGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTATGGAATTGGCTCCAGATGCATACAAAGTTGAG
CAACAGTTTGTGGAAATGGACCATGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGGACTTGGACT
ACTTCTTTCCTCACAAAGGATTGTAGAACATTTAATTGA
mRNA sequenceShow/hide mRNA sequence
TATACATATATTTTAACAAAATAGATAAATGGTAAATGCTCCCTCTCTCGCTCTTTATTTTTAGACTATTCCGCTATCCTGTTCGTGGTCAAATTTACTTTCTTG
TTTGATCTCCGCAAATTCCATCTCTCTCCACCGAATTCCTCTCTGTTTTTGCATCCCTCACCCTCTCCTTCAACCCTCTGCCGCCCAATTTCCAGCTTCTCGCTG
CCGATCTCCTTCCTTAGTCTACCAAATGCTTCCCGAATCGCACGACACCATCTTTGCTCCGGAAAAATCATCGGACGGTCCTGAATCAGCCGATGACACCATTGG
CCAAGCCGCTAGTTCTTCAAGTAATCAAGGTTTTCTTCAGTTTCCCAATAAAGATATCATTAGACGAATTGCAATCATTTCTACTGTTTCGGAACTGGCACTTTT
CTCCTCAACTGATGATGAAAATTCATATGATGATTCAGGCTCTTTCAAATTGAAAGCTCACTATGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTATGGAATT
GGCTCCAGATGCATACAAAGTTGAGCAACAGTTTGTGGAAATGGACCATGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGA
GTTTGGTGTTGAGGGGACTTGGACTACTTCTTTCCTCACAAAGGATTGTAGAACATTTAATTGA
Protein sequenceShow/hide protein sequence
MLPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSTDDENSYDDSGSFKLKAHYVEFYADWCEVCMELAPDAYKVE
QQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGTWTTSFLTKDCRTFN