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MELO3C026112 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C026112
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr10:8125649..8126319
RNA-Seq ExpressionMELO3C026112
SyntenyMELO3C026112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034829.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.1e-4171.65Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        ++LEK NDSLNT+AIQ+RKKNK LLRNIA+LHEE+EAK   +E+EVL  S++EYKSQ+I+ E KNRFLQ+AVNSSE QLLIC KA++V T+DYAQLIE Y
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGARGQ
        QEMSIDFM+W++EY TLRRKYD A G+
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGARGQ

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.6e-4375.59Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        +ELEK NDSLNT+AIQ+RKKNKRLLRNIA+LHEE+EAK   + +EVL  S+EEYKSQ+IEAE KN FLQ+AVNSSE QLLIC KARKV T+DYAQLIE Y
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGARGQ
        QEMSIDFM+W++EY TLRRKYD A G+
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGARGQ

KAA0049672.1 uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa]7.5e-4375.81Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        +ELEK NDSLNT+AIQ+RKKNKRLLRNIADLHEEMEAK   +E+EVL  S++EYKSQ IEA+ KNRFLQ+ VNSSE QLLIC KAR+V T+DYAQLIE Y
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGA
        QEM IDFM+W++EY TLRRKYD A
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGA

KAA0051514.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.1e-61100Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGARGQ
        QEMSIDFMIWRNEYNTLRRKYDGARGQ
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGARGQ

TYK12200.1 uncharacterized protein E5676_scaffold106G001510 [Cucumis melo var. makuwa]7.5e-4375.81Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        +ELEK NDSLNT+AIQ+RKKNKRLLRNIADLHEEMEAK   +E+EVL  S++EYKSQ IEA+ KNRFLQ+ VNSSE QLLIC KAR+V T+DYAQLIE Y
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGA
        QEM IDFM+W++EY TLRRKYD A
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGA

TrEMBL top hitse value%identityAlignment
A0A5A7T0F3 Glial fibrillary acidic protein-like5.2e-4271.65Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        ++LEK NDSLNT+AIQ+RKKNK LLRNIA+LHEE+EAK   +E+EVL  S++EYKSQ+I+ E KNRFLQ+AVNSSE QLLIC KA++V T+DYAQLIE Y
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGARGQ
        QEMSIDFM+W++EY TLRRKYD A G+
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGARGQ

A0A5A7TXA1 Glial fibrillary acidic protein-like1.2e-4375.59Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        +ELEK NDSLNT+AIQ+RKKNKRLLRNIA+LHEE+EAK   + +EVL  S+EEYKSQ+IEAE KN FLQ+AVNSSE QLLIC KARKV T+DYAQLIE Y
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGARGQ
        QEMSIDFM+W++EY TLRRKYD A G+
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGARGQ

A0A5A7U1L8 Retrotrans_gag domain-containing protein3.6e-4375.81Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        +ELEK NDSLNT+AIQ+RKKNKRLLRNIADLHEEMEAK   +E+EVL  S++EYKSQ IEA+ KNRFLQ+ VNSSE QLLIC KAR+V T+DYAQLIE Y
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGA
        QEM IDFM+W++EY TLRRKYD A
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGA

A0A5A7U875 Glial fibrillary acidic protein-like1.0e-61100Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGARGQ
        QEMSIDFMIWRNEYNTLRRKYDGARGQ
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGARGQ

A0A5D3CLA9 Retrotrans_gag domain-containing protein3.6e-4375.81Show/hide
Query:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY
        +ELEK NDSLNT+AIQ+RKKNKRLLRNIADLHEEMEAK   +E+EVL  S++EYKSQ IEA+ KNRFLQ+ VNSSE QLLIC KAR+V T+DYAQLIE Y
Subjt:  MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIY

Query:  QEMSIDFMIWRNEYNTLRRKYDGA
        QEM IDFM+W++EY TLRRKYD A
Subjt:  QEMSIDFMIWRNEYNTLRRKYDGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTAGAGAAGAATAACGATTCTTTAAACACTAAGGCAATCCAAATGAGAAAAAAGAATAAGAGGTTATTAAGGAACATTGCCGACTTGCATGAAGAGATGGAAGC
GAAAAATATTGTTGTGGAGGTCGAGGTTCTATGGCAATCAGTTGAAGAATACAAGTCCCAAGTTATAGAAGCGGAAAGAAAAAATAGATTTCTACAAGAAGCCGTTAACA
GTTCTGAAGGCCAGCTGCTGATATGTCATAAGGCAAGGAAGGTCGCAACAAATGACTATGCTCAATTAATAGAAATATATCAAGAAATGTCAATAGATTTCATGATATGG
AGGAATGAGTACAACACATTGAGGCGCAAGTATGATGGTGCTAGAGGTCAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAATATTTAGTTCCAAACATAAAATTGAAGAAATATCATGATGATAAAGAAAAGGAATTAAAGCGGTTAAGAGAAATAAATTATGTTTTGGCAACAGAGAACAA
AAAGTTAAGAGAAAAAGTCTAGACATGGATCTAACAAGCTGTTAGTACTCAAAGAGATTTGGATGAGGCGAAACGAAAGCAATGGAGCTAGAGAAGAATAACGATTCTTT
AAACACTAAGGCAATCCAAATGAGAAAAAAGAATAAGAGGTTATTAAGGAACATTGCCGACTTGCATGAAGAGATGGAAGCGAAAAATATTGTTGTGGAGGTCGAGGTTC
TATGGCAATCAGTTGAAGAATACAAGTCCCAAGTTATAGAAGCGGAAAGAAAAAATAGATTTCTACAAGAAGCCGTTAACAGTTCTGAAGGCCAGCTGCTGATATGTCAT
AAGGCAAGGAAGGTCGCAACAAATGACTATGCTCAATTAATAGAAATATATCAAGAAATGTCAATAGATTTCATGATATGGAGGAATGAGTACAACACATTGAGGCGCAA
GTATGATGGTGCTAGAGGTCAGA
Protein sequenceShow/hide protein sequence
MELEKNNDSLNTKAIQMRKKNKRLLRNIADLHEEMEAKNIVVEVEVLWQSVEEYKSQVIEAERKNRFLQEAVNSSEGQLLICHKARKVATNDYAQLIEIYQEMSIDFMIW
RNEYNTLRRKYDGARGQ