; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C026181 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C026181
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionexosome complex component RRP4 homolog
Genome locationchr02:26774164..26776212
RNA-Seq ExpressionMELO3C026181
SyntenyMELO3C026181
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0000178 - exosome (RNase complex) (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057748.1 exosome complex component RRP4-like protein [Cucumis melo var. makuwa]4.4e-18099.39Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRAR-YKPEIGDIVVGRV
        MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRAR YKPEIGDIVVGRV
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRAR-YKPEIGDIVVGRV

Query:  TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
Subjt:  TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN
        EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN
Subjt:  EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN

Query:  VHEMLGSEFFVLVAEKEVERRSCRKKRG
        VHEMLG EFFVLVAEKEVERRSCRKKRG
Subjt:  VHEMLGSEFFVLVAEKEVERRSCRKKRG

KAG6606437.1 Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia]9.5e-15986.54Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDI+YSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
        QYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGSKFEG+FGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSLSISLNI+V
Subjt:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV

Query:  HEMLGSEFFVLVAEKEVERRSCRKKRG
        HEMLGSEF VL AEKE ERR+  KKRG
Subjt:  HEMLGSEFFVLVAEKEVERRSCRKKRG

XP_008464390.1 PREDICTED: exosome complex component RRP4 homolog [Cucumis melo]3.6e-182100Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
        QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
Subjt:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV

Query:  HEMLGSEFFVLVAEKEVERRSCRKKRG
        HEMLGSEFFVLVAEKEVERRSCRKKRG
Subjt:  HEMLGSEFFVLVAEKEVERRSCRKKRG

XP_022995373.1 exosome complex component RRP4 homolog [Cucurbita maxima]8.1e-15886.24Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDL GEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDI+YSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
        QYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGSKFEG+FGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSLSISLNI+V
Subjt:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV

Query:  HEMLGSEFFVLVAEKEVERRSCRKKRG
        HEMLGSEF VL AEKE ERR+  KKRG
Subjt:  HEMLGSEFFVLVAEKEVERRSCRKKRG

XP_023533481.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]7.3e-15986.54Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDI+YSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
        QYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGSKFEGNFGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSL ISLNI+V
Subjt:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV

Query:  HEMLGSEFFVLVAEKEVERRSCRKKRG
        HEMLGSEF VL AEKE ERR+  KKRG
Subjt:  HEMLGSEFFVLVAEKEVERRSCRKKRG

TrEMBL top hitse value%identityAlignment
A0A1S3CLC6 exosome complex component RRP4 homolog1.7e-182100Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
        QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
Subjt:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV

Query:  HEMLGSEFFVLVAEKEVERRSCRKKRG
        HEMLGSEFFVLVAEKEVERRSCRKKRG
Subjt:  HEMLGSEFFVLVAEKEVERRSCRKKRG

A0A5A7URG7 Exosome complex component RRP4-like protein2.1e-18099.39Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRAR-YKPEIGDIVVGRV
        MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRAR YKPEIGDIVVGRV
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRAR-YKPEIGDIVVGRV

Query:  TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
Subjt:  TEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN
        EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN
Subjt:  EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN

Query:  VHEMLGSEFFVLVAEKEVERRSCRKKRG
        VHEMLG EFFVLVAEKEVERRSCRKKRG
Subjt:  VHEMLGSEFFVLVAEKEVERRSCRKKRG

A0A6J1EXY1 exosome complex component RRP4 homolog8.7e-15886.46Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDI+YSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
        QYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGSKFEG+FGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSLSISLNI+V
Subjt:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV

Query:  HEMLGSEFFVLVAEKEVERRSCRKK
        HEMLGSEF VL AEKE ERR+  KK
Subjt:  HEMLGSEFFVLVAEKEVERRSCRKK

A0A6J1HGD9 exosome complex component RRP4 homolog isoform X14.3e-15786.85Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MR LQI LN TQ+ RL+ A + LES+SSKAN DASV V DT+P +Y+DGVLKGHGTLDLNGEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+I+YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
        QYGIDLI GCNGFIWIG+HVD T+D MIEDQVNK EQKGSKFEG FGNQ+ ERV+TPLETRQNICRTANAIRVLS LGFI+TVEVIMETVSLS SLNINV
Subjt:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV

Query:  HEMLGSEFFVLVAEKEVERRSCRKKRG
        HEMLGSEF VL AEKE ERR+  KKRG
Subjt:  HEMLGSEFFVLVAEKEVERRSCRKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog3.9e-15886.24Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDL GEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVT
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDI+YSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
        QYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGSKFEG+FGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSLSISLNI+V
Subjt:  QYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV

Query:  HEMLGSEFFVLVAEKEVERRSCRKKRG
        HEMLGSEF VL AEKE ERR+  KKRG
Subjt:  HEMLGSEFFVLVAEKEVERRSCRKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp42.3e-4643.81Show/hide
Query:  LKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G +  ++ G V+RVNKLI V+ LR++Y PEIGD+++G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQ
        ++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ KH ++   ++    + ++E++ S  E  + N+
Subjt:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQ

Query:  MHERVHTPLETRQNICRTANAIRVLS
          E       TR NI R +  I+ L+
Subjt:  MHERVHTPLETRQNICRTANAIRVLS

Q13868 Exosome complex component RRP43.6e-4449.27Show/hide
Query:  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIH
        + RL  A+K L     +      V  GDT+  + + G ++GHGT     +++ ++ G VERVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +
Subjt:  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIH

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIWI
Subjt:  GFIWI

Q2KID0 Exosome complex component RRP41.2e-4448.78Show/hide
Query:  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIH
        + RL  A+K L     + +    V  GDT+  + + G ++GHGT     +++ ++ G VERVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +
Subjt:  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIH

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIW+
Subjt:  GFIWI

Q8VBV3 Exosome complex component RRP45.6e-4549.27Show/hide
Query:  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIH
        + RL  A+K L     + +    V  GDT+  + + G ++GHGT     +++ ++ G VERVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +
Subjt:  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIH

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIWI
Subjt:  GFIWI

Q9ZVT7 Exosome complex component RRP4 homolog5.7e-11463.91Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MR LQ+ L+ TQ+ R + A + L+SLSS AN DASV V D++P +++D  LKGHGT +++GE++ T+CGVVERV+KL+YVR+LRARYKPE+GDIVVGRV 
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR++++++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN
        E  GIDLI+GCNGFIW+G+HV+      I+DQ ++ E   S   G       E+ H PLETRQ ICR  NAIRVLS LGF +T+EVIMETV+LS S NI+
Subjt:  EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN

Query:  VHEMLGSEFFVLVAEKEVERRSCRKKR
        +H+MLGSEF V+VAE E ERR  ++K+
Subjt:  VHEMLGSEFFVLVAEKEVERRSCRKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 44.0e-11563.91Show/hide
Query:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MR LQ+ L+ TQ+ R + A + L+SLSS AN DASV V D++P +++D  LKGHGT +++GE++ T+CGVVERV+KL+YVR+LRARYKPE+GDIVVGRV 
Subjt:  MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR++++++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN
        E  GIDLI+GCNGFIW+G+HV+      I+DQ ++ E   S   G       E+ H PLETRQ ICR  NAIRVLS LGF +T+EVIMETV+LS S NI+
Subjt:  EQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN

Query:  VHEMLGSEFFVLVAEKEVERRSCRKKR
        +H+MLGSEF V+VAE E ERR  ++K+
Subjt:  VHEMLGSEFFVLVAEKEVERRSCRKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACTCGCCTTAAGAATGCCCAAAAAACGCTCGAGTCTCTCTCATCAAAGGCTAATTATGATGCTTCAGTTGC
AGTTGGTGATACTGTTCCTTTCAGTTACGAGGATGGCGTTCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTACCACTATTTGTGGAGTAGTTGAGCGAG
TCAATAAGCTTATCTATGTACGTTCCCTACGTGCCAGATATAAACCAGAGATTGGTGATATCGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGAT
ATACATTACAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGTATTTTTGA
AGAAAATGATGTTATTTGTGCAGAAGTACGTGGTTTTCAGCATGATGGACTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAACTTCTAACAG
TTTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGGTTTATCTGGATCGGGAAGCATGTT
GATTCTACACAGGACACGATGATAGAAGATCAAGTTAATAAAATTGAACAAAAGGGTTCAAAATTTGAAGGAAACTTTGGCAACCAAATGCACGAAAGAGTACATACTCC
ATTAGAGACACGGCAGAATATATGCAGAACTGCAAATGCTATTCGAGTGTTGTCTATCTTAGGTTTTATAATAACAGTAGAAGTCATAATGGAGACAGTTAGTCTAAGTA
TTTCTCTGAACATCAATGTACATGAAATGCTCGGTTCGGAGTTCTTTGTCCTTGTGGCAGAAAAAGAGGTTGAACGACGAAGTTGCAGAAAGAAGAGAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACTCGCCTTAAGAATGCCCAAAAAACGCTCGAGTCTCTCTCATCAAAGGCTAATTATGATGCTTCAGTTGC
AGTTGGTGATACTGTTCCTTTCAGTTACGAGGATGGCGTTCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTACCACTATTTGTGGAGTAGTTGAGCGAG
TCAATAAGCTTATCTATGTACGTTCCCTACGTGCCAGATATAAACCAGAGATTGGTGATATCGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGAT
ATACATTACAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGTATTTTTGA
AGAAAATGATGTTATTTGTGCAGAAGTACGTGGTTTTCAGCATGATGGACTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAACTTCTAACAG
TTTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGGTTTATCTGGATCGGGAAGCATGTT
GATTCTACACAGGACACGATGATAGAAGATCAAGTTAATAAAATTGAACAAAAGGGTTCAAAATTTGAAGGAAACTTTGGCAACCAAATGCACGAAAGAGTACATACTCC
ATTAGAGACACGGCAGAATATATGCAGAACTGCAAATGCTATTCGAGTGTTGTCTATCTTAGGTTTTATAATAACAGTAGAAGTCATAATGGAGACAGTTAGTCTAAGTA
TTTCTCTGAACATCAATGTACATGAAATGCTCGGTTCGGAGTTCTTTGTCCTTGTGGCAGAAAAAGAGGTTGAACGACGAAGTTGCAGAAAGAAGAGAGGGTGATTTGGT
T
Protein sequenceShow/hide protein sequence
MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLD
IHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHV
DSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINVHEMLGSEFFVLVAEKEVERRSCRKKRG