; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C026206 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C026206
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionprotein indeterminate-domain 16
Genome locationchr02:26634850..26635743
RNA-Seq ExpressionMELO3C026206
SyntenyMELO3C026206
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039288 - Zinc finger protein SHOOT GRAVITROPISM 5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057771.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]9.0e-8499.42Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

KAE8652381.1 hypothetical protein Csa_014379 [Cucumis sativus]9.9e-7596.47Show/hide
Query:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI
        MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQI
Subjt:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI

Query:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
        RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Subjt:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ

XP_004138047.1 protein indeterminate-domain 16 [Cucumis sativus]7.4e-7896.57Show/hide
Query:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI
        MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQI
Subjt:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI

Query:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_008464429.1 PREDICTED: protein indeterminate-domain 16 [Cucumis melo]3.1e-84100Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_038878928.1 protein indeterminate-domain 16 [Benincasa hispida]1.1e-7694.74Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSD FEA   GSVDLQLSISLRPIRP     ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

TrEMBL top hitse value%identityAlignment
A0A0A0LRS8 Uncharacterized protein3.6e-7896.57Show/hide
Query:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI
        MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQI
Subjt:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI

Query:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A1S3CN02 protein indeterminate-domain 161.5e-84100Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5A7UWD1 Protein indeterminate-domain 164.3e-8499.42Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5D3BFD1 Protein indeterminate-domain 161.5e-84100Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A6J1E4S8 protein indeterminate-domain 16-like1.4e-7189.6Show/hide
Query:  MEDEDQKELQLLPTPHSIA--SSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRL
        MEDEDQKELQLLPTPH+IA  SSSSHMSSRPS SS+RFRSDP+EAG  GS+DLQLSIS+RPIRP     EC+FKYEEVMKPEAASCVEALKWQAAEQIRL
Subjt:  MEDEDQKELQLLPTPHSIA--SSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRL

Query:  AAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AAMEKAYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Subjt:  AAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

SwissProt top hitse value%identityAlignment
F4IPE3 Zinc finger protein SHOOT GRAVITROPISM 51.3e-0841.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9C9X7 Protein indeterminate-domain 141.6e-0644.44Show/hide
Query:  ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        E  R  TKR+IE+A+ EFA A+++ + AR E+ KA   +E A+R++ +T M+ITC +C+Q F+
Subjt:  ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9FRH4 Protein indeterminate-domain 169.2e-0732.64Show/hide
Query:  RPSDSSLRFRSDPFEAGSG--GSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFA
        RPS+      + PF A S    S++LQLSI +          E   K E  +  E A+                  E   AE  R+  KR+IE+A+ +F 
Subjt:  RPSDSSLRFRSDPFEAGSG--GSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFA

Query:  RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        +A+++ E A+ E+EKA  ++E A +++++T MEITC SC+Q F+
Subjt:  RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Arabidopsis top hitse value%identityAlignment
AT1G25250.1 indeterminate(ID)-domain 166.6e-0832.64Show/hide
Query:  RPSDSSLRFRSDPFEAGSG--GSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFA
        RPS+      + PF A S    S++LQLSI +          E   K E  +  E A+                  E   AE  R+  KR+IE+A+ +F 
Subjt:  RPSDSSLRFRSDPFEAGSG--GSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFA

Query:  RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        +A+++ E A+ E+EKA  ++E A +++++T MEITC SC+Q F+
Subjt:  RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.1 C2H2-like zinc finger protein9.1e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.2 C2H2-like zinc finger protein9.1e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.3 C2H2-like zinc finger protein9.1e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3)1.3e-3253.22Show/hide
Query:  EDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGS--GGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLA
        + +  KELQLLP+P S  + S     RP+  +    ++   + S     +DL+LSISL  I             EE+  P     VEALKWQAAEQIRLA
Subjt:  EDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGS--GGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLA

Query:  AMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP
        A+EKAYAERVRELT+RE+E+AQ+EFARAR MW++AREEVE+AER+KER+  ++D+ C+EITC SCRQRFRP
Subjt:  AMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCCGTCCATCCGACTCCTCGTTACGGTTCCG
TTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGAGTGCTTGTTCAAGTACG
AGGAGGTGATGAAGCCGGAGGCAGCGAGCTGTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGA
GAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAG
AGCAACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCCGTCCATCCGACTCCTCGTTACGGTTCCG
TTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGAGTGCTTGTTCAAGTACG
AGGAGGTGATGAAGCCGGAGGCAGCGAGCTGTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGA
GAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAG
AGCAACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATTATCTTTAATCATAATTTTACCTCATTAAT
TACCCCTTTCCATTTCCCTTAATTATCCAGAGTTCCTTTTAATTAAATCTCTGCTTGGGTCTGTTTTCTTTTTTTCTTTTTAATTAATCATTTAAATTAAGTAAACTAAA
GAAAAAAAAAAATATATATATATATATGGGGTTCTTAATTAGTTGGATCATTACCATCTTTGATCATCAACAATTACACATTAAATAATTCAAAATTGGAGTTCAAATTC
AATTTTGTTTTGGAAATTTGTTTTGGTCTCCTAGTAATTTAATTTCTTGGTTGTTTAGTGAATTAAGTTTGTATGATATTTTAATATATTATTGATAATTATATATGGAT
GATTTGTTTATGAC
Protein sequenceShow/hide protein sequence
MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVR
ELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS