; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C027092 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C027092
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDExH-box ATP-dependent RNA helicase
Genome locationchr06:5450320..5451240
RNA-Seq ExpressionMELO3C027092
SyntenyMELO3C027092
Gene Ontology termsGO:0006401 - RNA catabolic process (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR004179 - Sec63 domain
IPR014756 - Immunoglobulin E-set
IPR035892 - C2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052176.1 DExH-box ATP-dependent RNA helicase DExH12-like [Cucumis melo var. makuwa]7.0e-12497.83Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFIH
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H EHFLLKKQYIDEDHTLNFTVPICEPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

XP_004147618.1 DExH-box ATP-dependent RNA helicase DExH12 [Cucumis sativus]7.0e-12497.83Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFIH
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H EHFLLKKQYIDEDHTLNFTVPICEPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

XP_008439389.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH12-like [Cucumis melo]7.0e-12497.83Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFIH
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H EHFLLKKQYIDEDHTLNFTVPICEPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

XP_022157162.1 DExH-box ATP-dependent RNA helicase DExH12 [Momordica charantia]1.2e-12096.52Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFI 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLKKQYIDEDHTLNFTVPI EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

XP_038884352.1 DExH-box ATP-dependent RNA helicase DExH12-like [Benincasa hispida]3.5e-12397.39Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFIH
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLKKQYIDEDHTLNFTVPICEPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

TrEMBL top hitse value%identityAlignment
A0A0A0L839 Uncharacterized protein3.4e-12497.83Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFIH
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H EHFLLKKQYIDEDHTLNFTVPICEPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

A0A1S3AYP2 DExH-box ATP-dependent RNA helicase DExH12-like3.4e-12497.83Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFIH
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H EHFLLKKQYIDEDHTLNFTVPICEPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

A0A5A7UD98 DExH-box ATP-dependent RNA helicase DExH12-like3.4e-12497.83Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFIH
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H EHFLLKKQYIDEDHTLNFTVPICEPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

A0A6J1DTU4 DExH-box ATP-dependent RNA helicase DExH126.0e-12196.52Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGEFI 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLKKQYIDEDHTLNFTVPI EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

A0A6J1J3P2 DExH-box ATP-dependent RNA helicase DExH12-like2.8e-11894.78Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRA+FEIVLKRGWAQLAEKALNLCKMVSKRMW+VQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        ISNDILMKLEKKDLAW+RYYDLSSQELGELIRAPKMGRTLHKFIHQFPKL++AAHVQPITRTVLRVELTITPDFQWEDKVH YVESFWVLVEDNDGE I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLKKQYIDEDHTLNFTV I EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

SwissProt top hitse value%identityAlignment
O48534 DExH-box ATP-dependent RNA helicase DExH131.4e-10380Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLL+RVPIP+KE+LE+PSAKINVLLQ YIS+LKLEGLSLTSDMV+ITQSAGRL+RAIFEIVLKRGWAQL++KALNL KMV KRMWSVQTPL QF G
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        I  +ILMKLEK DL WERYYDLSSQELGELI  PKMGR LHK+IHQFPKL +AAHVQPI+R+VL+VELT+TPDF W+DK ++YVE FW++VEDNDGE I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FL KK+ IDEDHTLNFTVPI EP+PP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

O75643 U5 small nuclear ribonucleoprotein 200 kDa helicase4.9e-8865.65Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        +EL KLLERVPIP+KES+EEPSAKINVLLQA+ISQLKLEG +L +DMV++TQSAGRLMRAIFEIVL RGWAQL +K LNLCKM+ KRMW    PLRQF  
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        +  +++ K+EKK+  +ER YDL+  E+GELIR PKMG+T+HK++H FPKL+++ H+QPITR+ L+VELTITPDFQW++KVH   E+FW+LVED D E I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLK +Y  ++H + F VP+ EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase4.9e-8865.65Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        +EL KLLERVPIP+KES+EEPSAKINVLLQA+ISQLKLEG +L +DMV++TQSAGRLMRAIFEIVL RGWAQL +K LNLCKM+ KRMW    PLRQF  
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        +  +++ K+EKK+  +ER YDL+  E+GELIR PKMG+T+HK++H FPKL+++ H+QPITR+ L+VELTITPDFQW++KVH   E+FW+LVED D E I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLK +Y  ++H + F VP+ EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

Q9SYP1 DExH-box ATP-dependent RNA helicase DExH121.4e-11184.78Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLL+RVPIPIKE+LEEPSAKINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RA++EIVLKRGWAQLAEKALNL KMV KRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        +SNDILM+LEKKDL WERYYDLS+QELGELIR+PKMG+ LHKFIHQFPK+ ++AHVQPITRTVL VELT+TPDF W++K+H+YVE FW++VEDNDGE I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLKKQYIDEDHTL+FTVPI EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

Q9VUV9 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase7.6e-8968.7Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        +EL KL+ERVPIPIKES+EE SAK+NVLLQAYISQLKLEG +L SDMVFITQSA RLMRAIFEIVL RGWAQLA+K L LCKM+ +RMW   TPLRQF  
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        + ++I  KLEKK   W R YDL   ELGELIR PK+G+T+HKF+HQFPKL+++ H+QPITR  LRVELTITPDFQW++KVH   E FWVL+ED D E I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E FLLK++Y  ++H L F VP+ EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

Arabidopsis top hitse value%identityAlignment
AT1G20960.1 U5 small nuclear ribonucleoprotein helicase, putative1.0e-11284.78Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLL+RVPIPIKE+LEEPSAKINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RA++EIVLKRGWAQLAEKALNL KMV KRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        +SNDILM+LEKKDL WERYYDLS+QELGELIR+PKMG+ LHKFIHQFPK+ ++AHVQPITRTVL VELT+TPDF W++K+H+YVE FW++VEDNDGE I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLKKQYIDEDHTL+FTVPI EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

AT1G20960.2 U5 small nuclear ribonucleoprotein helicase, putative1.0e-11284.78Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLL+RVPIPIKE+LEEPSAKINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RA++EIVLKRGWAQLAEKALNL KMV KRMWSVQTPLRQFHG
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        +SNDILM+LEKKDL WERYYDLS+QELGELIR+PKMG+ LHKFIHQFPK+ ++AHVQPITRTVL VELT+TPDF W++K+H+YVE FW++VEDNDGE I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FLLKKQYIDEDHTL+FTVPI EPLPP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

AT2G42270.1 U5 small nuclear ribonucleoprotein helicase1.0e-10480Show/hide
Query:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG
        MELAKLL+RVPIP+KE+LE+PSAKINVLLQ YIS+LKLEGLSLTSDMV+ITQSAGRL+RAIFEIVLKRGWAQL++KALNL KMV KRMWSVQTPL QF G
Subjt:  MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG

Query:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH
        I  +ILMKLEK DL WERYYDLSSQELGELI  PKMGR LHK+IHQFPKL +AAHVQPI+R+VL+VELT+TPDF W+DK ++YVE FW++VEDNDGE I 
Subjt:  ISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIH

Query:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP
        H E+FL KK+ IDEDHTLNFTVPI EP+PP
Subjt:  HREHFLLKKQYIDEDHTLNFTVPICEPLPP

AT5G61140.1 U5 small nuclear ribonucleoprotein helicase8.7e-4040.09Show/hide
Query:  PIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQF-HGISNDILMKL
        P+ +K        KI++L+Q YIS+  ++  SL SD  +I+ S  R+MRA+FEI L++GW ++    L  CK V +++W  Q PLRQF   + +D     
Subjt:  PIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQF-HGISNDILMKL

Query:  EKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIHHREHFLLKK
         + DL  +  Y++  +E+G LIR    GR L      FP + +AA V PITRTVL+V+L ITP+F W+D+ H     +W+L+ED + ++I+H + F L K
Subjt:  EKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIHHREHFLLKK

Query:  QYI-DEDHTLNFTVPICEPLPP
        +    E   L+FTVPI EP PP
Subjt:  QYI-DEDHTLNFTVPICEPLPP

AT5G61140.2 U5 small nuclear ribonucleoprotein helicase4.0e-4540.99Show/hide
Query:  PIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQF-HGISNDILMKL
        P+ +K        KI++L+Q YIS+  ++  SL SD  +I+ S  R+MRA+FEI L++GW ++    L  CK V +++W  Q PLRQF   + +DIL KL
Subjt:  PIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQF-HGISNDILMKL

Query:  EKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIHHREHFLLKK
        E++    +  Y++  +E+G LIR    GR + + +  FP + +AA V PITRTVL+V+L ITP+F W+D+ H     +W+L+ED + ++I+H + F L K
Subjt:  EKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIHHREHFLLKK

Query:  QYI-DEDHTLNFTVPICEPLPP
        +    E   L+FTVPI EP PP
Subjt:  QYI-DEDHTLNFTVPICEPLPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTAGCAAAGCTGCTGGAACGTGTTCCAATTCCTATCAAGGAAAGCTTGGAGGAACCCAGTGCCAAGATCAATGTTTTGCTGCAAGCATATATATCTCAGTTAAA
GCTGGAAGGGCTGTCACTGACATCTGACATGGTGTTCATAACTCAGAGTGCTGGACGGCTTATGCGGGCTATTTTTGAGATTGTTCTGAAACGAGGATGGGCACAACTTG
CCGAGAAGGCCTTGAACTTGTGCAAGATGGTGAGTAAAAGGATGTGGAGTGTCCAGACACCTCTCCGGCAATTCCATGGTATCTCCAATGATATTCTTATGAAGCTTGAG
AAGAAGGATTTGGCTTGGGAACGGTATTATGATCTCTCATCGCAGGAGCTAGGTGAGCTTATACGTGCCCCCAAAATGGGTAGAACTCTACATAAGTTCATCCATCAATT
CCCTAAATTGGATATGGCGGCACATGTTCAGCCAATTACACGTACAGTTCTGAGAGTTGAGCTTACAATAACACCAGACTTCCAGTGGGAGGACAAGGTTCATGAATATG
TAGAGTCGTTTTGGGTACTTGTGGAGGATAATGATGGTGAATTTATACATCATCGTGAGCATTTCTTGTTGAAGAAGCAGTACATTGATGAGGATCACACTTTGAATTTC
ACGGTGCCAATATGTGAACCACTACCCCCA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTAGCAAAGCTGCTGGAACGTGTTCCAATTCCTATCAAGGAAAGCTTGGAGGAACCCAGTGCCAAGATCAATGTTTTGCTGCAAGCATATATATCTCAGTTAAA
GCTGGAAGGGCTGTCACTGACATCTGACATGGTGTTCATAACTCAGAGTGCTGGACGGCTTATGCGGGCTATTTTTGAGATTGTTCTGAAACGAGGATGGGCACAACTTG
CCGAGAAGGCCTTGAACTTGTGCAAGATGGTGAGTAAAAGGATGTGGAGTGTCCAGACACCTCTCCGGCAATTCCATGGTATCTCCAATGATATTCTTATGAAGCTTGAG
AAGAAGGATTTGGCTTGGGAACGGTATTATGATCTCTCATCGCAGGAGCTAGGTGAGCTTATACGTGCCCCCAAAATGGGTAGAACTCTACATAAGTTCATCCATCAATT
CCCTAAATTGGATATGGCGGCACATGTTCAGCCAATTACACGTACAGTTCTGAGAGTTGAGCTTACAATAACACCAGACTTCCAGTGGGAGGACAAGGTTCATGAATATG
TAGAGTCGTTTTGGGTACTTGTGGAGGATAATGATGGTGAATTTATACATCATCGTGAGCATTTCTTGTTGAAGAAGCAGTACATTGATGAGGATCACACTTTGAATTTC
ACGGTGCCAATATGTGAACCACTACCCCCACA
Protein sequenceShow/hide protein sequence
MELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAIFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHGISNDILMKLE
KKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLDMAAHVQPITRTVLRVELTITPDFQWEDKVHEYVESFWVLVEDNDGEFIHHREHFLLKKQYIDEDHTLNF
TVPICEPLPP