; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C027093 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C027093
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDExH-box ATP-dependent RNA helicase DExH12-like
Genome locationchr06:5451265..5453131
RNA-Seq ExpressionMELO3C027093
SyntenyMELO3C027093
Gene Ontology termsGO:0006401 - RNA catabolic process (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR004179 - Sec63 domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033568.1 DExH-box ATP-dependent RNA helicase DExH12-like [Cucumis melo var. makuwa]1.2e-11499.51Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITGQIVLGTVQNAREACNW
        MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITGQIVLGTVQNAREACNW
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITGQIVLGTVQNAREACNW

Query:  LGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFS
        LGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFS
Subjt:  LGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFS

Query:  LSEEFK
        LSEEFK
Subjt:  LSEEFK

KAA0052176.1 DExH-box ATP-dependent RNA helicase DExH12-like [Cucumis melo var. makuwa]4.1e-10784.39Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        MT+VDRQLVEDLFADGHIQVLVST TLAWGVNLP HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSE TGIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

XP_004147618.1 DExH-box ATP-dependent RNA helicase DExH12 [Cucumis sativus]5.9e-10683.97Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        MT+VDRQLVEDLFADGHIQVLVST TLAWGVNLP HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSE TGIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREA NWLGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

XP_008439389.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH12-like [Cucumis melo]4.1e-10784.39Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        MT+VDRQLVEDLFADGHIQVLVST TLAWGVNLP HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSE TGIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

XP_038884352.1 DExH-box ATP-dependent RNA helicase DExH12-like [Benincasa hispida]7.7e-10683.54Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        MT+VDRQLVEDLFADGHIQVLVST TLAWGVNLP HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDS   GIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

TrEMBL top hitse value%identityAlignment
A0A0A0L839 Uncharacterized protein2.9e-10683.97Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        MT+VDRQLVEDLFADGHIQVLVST TLAWGVNLP HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSE TGIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREA NWLGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

A0A1S3AYP2 DExH-box ATP-dependent RNA helicase DExH12-like2.0e-10784.39Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        MT+VDRQLVEDLFADGHIQVLVST TLAWGVNLP HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSE TGIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

A0A5A7SSL4 DExH-box ATP-dependent RNA helicase DExH12-like5.7e-11599.51Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITGQIVLGTVQNAREACNW
        MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITGQIVLGTVQNAREACNW
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITGQIVLGTVQNAREACNW

Query:  LGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFS
        LGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFS
Subjt:  LGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFS

Query:  LSEEFK
        LSEEFK
Subjt:  LSEEFK

A0A5A7UD98 DExH-box ATP-dependent RNA helicase DExH12-like2.0e-10784.39Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        MT+VDRQLVEDLFADGHIQVLVST TLAWGVNLP HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSE TGIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAA+APTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

A0A6J1DTU4 DExH-box ATP-dependent RNA helicase DExH122.5e-10281.86Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        MT+VDRQLVEDLFADGHIQVLVST TLAWGVNLP H VIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDS   GIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLA +A TRDITLEERRADLIHSAA ILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

SwissProt top hitse value%identityAlignment
F1LNJ2 U5 small nuclear ribonucleoprotein 200 kDa helicase1.2e-7760.34Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------
        MT+VDR LVEDLFAD HIQVLVST TLAWGVNLP H VIIKGTQ+Y+PEKG WTEL  LD++QMLGRAGRPQ+D++  GI+IT                 
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------

Query:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLG VQNA++A NWLGY YLY+RMLR+PTLYG++ +    D  L++RR DL+H+AA +LDKNNLVKYD+K+G FQVT+LGRIA
Subjt:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        S+YYIT+ T+ TYN+ LKP + +IEL R+FSLS EFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

O48534 DExH-box ATP-dependent RNA helicase DExH138.0e-9067.51Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        +T+ DR++VE+ F  G++QVL+ST TLAWGVNLP H VIIKGTQ+YNPE+G W ELSPLDVMQM+GRAGRPQ+D +  GIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGT+QNAREAC+WLGYTYLYVRM+RNPTLYG++ +A  +D+ LEERRADLIHSAATILDKNNL+KYDRKSG+FQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYI+HGTI+ YNE+LKP M DIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

O75643 U5 small nuclear ribonucleoprotein 200 kDa helicase1.2e-7760.34Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------
        MT+VDR LVEDLFAD HIQVLVST TLAWGVNLP H VIIKGTQ+Y+PEKG WTEL  LD++QMLGRAGRPQ+D++  GI+IT                 
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------

Query:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLG VQNA++A NWLGY YLY+RMLR+PTLYG++ +    D  L++RR DL+H+AA +LDKNNLVKYD+K+G FQVT+LGRIA
Subjt:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        S+YYIT+ T+ TYN+ LKP + +IEL R+FSLS EFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase1.2e-7760.34Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------
        MT+VDR LVEDLFAD HIQVLVST TLAWGVNLP H VIIKGTQ+Y+PEKG WTEL  LD++QMLGRAGRPQ+D++  GI+IT                 
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------

Query:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLG VQNA++A NWLGY YLY+RMLR+PTLYG++ +    D  L++RR DL+H+AA +LDKNNLVKYD+K+G FQVT+LGRIA
Subjt:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        S+YYIT+ T+ TYN+ LKP + +IEL R+FSLS EFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

Q9SYP1 DExH-box ATP-dependent RNA helicase DExH122.4e-9471.73Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        +++ DR++VE LF+ GH+QVLVST TLAWGVNLP H VIIKGTQ+YNPEKGAW ELSPLDVMQMLGRAGRPQ+D    GIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREAC+WLGYTYLY+RM+RNPTLYGLA +A  +D+ LEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTI+TYNEHLKP MGDI+L RLFSLS+EFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

Arabidopsis top hitse value%identityAlignment
AT1G20960.1 U5 small nuclear ribonucleoprotein helicase, putative1.7e-9571.73Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        +++ DR++VE LF+ GH+QVLVST TLAWGVNLP H VIIKGTQ+YNPEKGAW ELSPLDVMQMLGRAGRPQ+D    GIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREAC+WLGYTYLY+RM+RNPTLYGLA +A  +D+ LEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTI+TYNEHLKP MGDI+L RLFSLS+EFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

AT1G20960.2 U5 small nuclear ribonucleoprotein helicase, putative1.7e-9571.73Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        +++ DR++VE LF+ GH+QVLVST TLAWGVNLP H VIIKGTQ+YNPEKGAW ELSPLDVMQMLGRAGRPQ+D    GIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGTVQNAREAC+WLGYTYLY+RM+RNPTLYGLA +A  +D+ LEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYITHGTI+TYNEHLKP MGDI+L RLFSLS+EFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

AT2G42270.1 U5 small nuclear ribonucleoprotein helicase5.7e-9167.51Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------
        +T+ DR++VE+ F  G++QVL+ST TLAWGVNLP H VIIKGTQ+YNPE+G W ELSPLDVMQM+GRAGRPQ+D +  GIIITG                
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITG----------------

Query:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       +IVLGT+QNAREAC+WLGYTYLYVRM+RNPTLYG++ +A  +D+ LEERRADLIHSAATILDKNNL+KYDRKSG+FQVTDLGRIA
Subjt:  ---------------QIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        SYYYI+HGTI+ YNE+LKP M DIELCRLFSLSEEFK
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

AT5G61140.1 U5 small nuclear ribonucleoprotein helicase5.6e-5444.73Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------
        M + DR L E LF+DG ++VLV T TLAWGVNLP H V+IKGTQ+Y+ + G W +L  LDVMQ+ GRAGRPQFD    GIIIT                 
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------

Query:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       ++VLGTV N +EAC WLGYTYL +RM  NP  YG+       D +L  ++  L+  AA  LDK  ++++D KSG F  T+LGR+A
Subjt:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        S++YI + ++ TYNE LK  M + E+  + + S EF+
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK

AT5G61140.2 U5 small nuclear ribonucleoprotein helicase5.6e-5444.73Show/hide
Query:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------
        M + DR L E LF+DG ++VLV T TLAWGVNLP H V+IKGTQ+Y+ + G W +L  LDVMQ+ GRAGRPQFD    GIIIT                 
Subjt:  MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIIT-----------------

Query:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA
                       ++VLGTV N +EAC WLGYTYL +RM  NP  YG+       D +L  ++  L+  AA  LDK  ++++D KSG F  T+LGR+A
Subjt:  --------------GQIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIA

Query:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK
        S++YI + ++ TYNE LK  M + E+  + + S EF+
Subjt:  SYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGGTTGATCGCCAACTTGTTGAGGATCTTTTTGCTGATGGTCATATTCAAGTTTTGGTTTCAACGACTACTCTTGCTTGGGGTGTGAATCTGCCAACT
CATTGTGTTATTATCAAGGGAACCCAAATTTACAATCCAGAGAAAGGAGCATGGACTGAGTTGAGTCCTTTAGATGTTATGCAGATGCTGGGTCGTGCAGGAAGA
CCACAATTTGATTCTGAGCGAACAGGAATAATCATCACGGGACAAATTGTTCTTGGAACGGTTCAAAATGCCAGAGAAGCGTGTAATTGGTTGGGATATACTTAC
TTGTACGTTCGTATGCTAAGGAATCCCACCCTCTATGGACTAGCAGCTAATGCTCCTACAAGGGATATAACATTGGAAGAGAGGAGAGCTGATTTGATTCATTCA
GCTGCTACAATTTTAGATAAAAATAATCTAGTGAAGTATGACCGGAAAAGTGGGTATTTCCAAGTTACAGACTTGGGTCGCATTGCTAGCTACTACTATATAACA
CATGGAACAATATCCACTTACAATGAGCATTTGAAGCCAATGATGGGGGATATTGAACTATGTCGTTTGTTCTCATTGAGTGAAGAATTTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGGTTGATCGCCAACTTGTTGAGGATCTTTTTGCTGATGGTCATATTCAAGTTTTGGTTTCAACGACTACTCTTGCTTGGGGTGTGAATCTGCCAACT
CATTGTGTTATTATCAAGGGAACCCAAATTTACAATCCAGAGAAAGGAGCATGGACTGAGTTGAGTCCTTTAGATGTTATGCAGATGCTGGGTCGTGCAGGAAGA
CCACAATTTGATTCTGAGCGAACAGGAATAATCATCACGGGACAAATTGTTCTTGGAACGGTTCAAAATGCCAGAGAAGCGTGTAATTGGTTGGGATATACTTAC
TTGTACGTTCGTATGCTAAGGAATCCCACCCTCTATGGACTAGCAGCTAATGCTCCTACAAGGGATATAACATTGGAAGAGAGGAGAGCTGATTTGATTCATTCA
GCTGCTACAATTTTAGATAAAAATAATCTAGTGAAGTATGACCGGAAAAGTGGGTATTTCCAAGTTACAGACTTGGGTCGCATTGCTAGCTACTACTATATAACA
CATGGAACAATATCCACTTACAATGAGCATTTGAAGCCAATGATGGGGGATATTGAACTATGTCGTTTGTTCTCATTGAGTGAAGAATTTAAATAA
Protein sequenceShow/hide protein sequence
MTKVDRQLVEDLFADGHIQVLVSTTTLAWGVNLPTHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSERTGIIITGQIVLGTVQNAREACNWLGYTY
LYVRMLRNPTLYGLAANAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFSLSEEFK