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MELO3C027133 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C027133
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr01:32722752..32723242
RNA-Seq ExpressionMELO3C027133
SyntenyMELO3C027133
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6752347.1 hypothetical protein POTOM_044571 [Populus tomentosa]1.8e-0476.67Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        MG+ +KGFIPYIKVRQKVVEGL D G+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
TYK28221.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.4e-0996.97Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNLLVP
        MGIIDKGFIPYIKVRQKVVEGLADIGKWNLL+P
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNLLVP
XP_006376410.1 pentatricopeptide repeat-containing protein At1g06270 [Populus trichocarpa]1.8e-0476.67Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        MG+ +KGFIPYIKVRQKVVEGL D G+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
XP_011037416.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Populus euphratica]8.0e-0573.33Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        MG+ +KGFIPYIKVRQKV+EGL D+G+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
XP_034916673.1 pentatricopeptide repeat-containing protein At1g06270 [Populus alba]1.8e-0476.67Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        MG+ +KGFIPYIKVRQKVVEGL D G+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
TrEMBL top hitse value%identityAlignment
A0A4U5QQN5 Pentatricopeptide repeat-containing protein8.6e-0576.67Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        MG+ +KGFIPYIKVRQKVVEGL D G+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
A0A5D3DX68 Pentatricopeptide repeat-containing protein6.8e-1096.97Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNLLVP
        MGIIDKGFIPYIKVRQKVVEGLADIGKWNLL+P
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNLLVP
A0A5N5KI65 Uncharacterized protein8.6e-0576.67Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        MG+ +KGFIPYIKVRQKVVEGL D G+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
A0A6N2KAZ7 Uncharacterized protein8.6e-0576.67Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        MG+ +KGFIPYIKVRQKVVEGL D G+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
U5FY35 Uncharacterized protein8.6e-0576.67Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        MG+ +KGFIPYIKVRQKVVEGL D G+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
SwissProt top hitse value%identityAlignment
Q9LNC0 Pentatricopeptide repeat-containing protein At1g062701.3e-0570Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        M + D+GFIPYIKVRQKVVE L +IG+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein9.1e-0770Show/hide
Query:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL
        M + D+GFIPYIKVRQKVVE L +IG+W L
Subjt:  MGIIDKGFIPYIKVRQKVVEGLADIGKWNL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATAATAGACAAAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTCGAGGGACTTGCTGACATTGGAAAGTGGAATTTGCTTGTGCCGTAA
mRNA sequenceShow/hide mRNA sequence
CTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGAAATTGCTAAAAGAA
ATGGTTGTAAAAGTTAAATTGACGGAACGATTATTCACGTTGTGGCTGCGTTACGAGCAAACCGAGAGGTAAGAATAGCAGTGGAGATCATTGAGCTGTTGGAGA
GGACAGTCATGATGTTGGTTTGAGAGCTACGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGAGAAAGGTGACCATGGGGATAATAGAC
AAAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTCGAGGGACTTGCTGACATTGGAAAGTGGAATTTGCTTGTGCCGTAAGACGCAAATTTGTAGAGA
TGGAGTCTTAG
Protein sequenceShow/hide protein sequence
MGIIDKGFIPYIKVRQKVVEGLADIGKWNLLVP