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MELO3C027228 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C027228
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPeriodic tryptophan protein 1-like protein
Genome locationchr12:9283445..9283595
RNA-Seq ExpressionMELO3C027228
SyntenyMELO3C027228
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043115.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]1.1e-0583.78Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
        MDVED SDE+IANALAVAQAL KSSETTNL+TKYD +
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
KAA0050205.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]2.5e-0581.08Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
        MDVED SDE+I NALAVAQAL KSSETTNL+TKYD +
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
KAA0052054.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]9.7e-10100Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTLLK
        MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTLLK
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTLLK
TYJ96216.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]1.1e-0583.78Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
        MDVED SDE+IANALAVAQAL KSSETTNL+TKYD +
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
XP_008452352.1 PREDICTED: periodic tryptophan protein 1 homolog [Cucumis melo]1.1e-0583.78Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
        MDVED SDE+IANALAVAQAL KSSETTNL+TKYD +
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
TrEMBL top hitse value%identityAlignment
A0A1S3BUS3 periodic tryptophan protein 1 homolog5.4e-0683.78Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
        MDVED SDE+IANALAVAQAL KSSETTNL+TKYD +
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
A0A5A7TNX2 Periodic tryptophan protein 1-like protein5.4e-0683.78Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
        MDVED SDE+IANALAVAQAL KSSETTNL+TKYD +
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
A0A5A7U9C7 Periodic tryptophan protein 1-like protein1.2e-0581.08Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
        MDVED SDE+I NALAVAQAL KSSETTNL+TKYD +
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
A0A5A7U9N1 Periodic tryptophan protein 1-like protein4.7e-10100Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTLLK
        MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTLLK
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTLLK
A0A5D3BBF1 Periodic tryptophan protein 1-like protein5.4e-0683.78Show/hide
Query:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
        MDVED SDE+IANALAVAQAL KSSETTNL+TKYD +
Subjt:  MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTGAAGACGCCAGTGATGAACAGATTGCCAATGCCCTAGCTGTTGCACAAGCACTTAGAAAATCTTCTGAGACCACGAATCTAAAAACCAAATATGAC
ACATTGCTGAAG
mRNA sequenceShow/hide mRNA sequence
TAAACATAGTGATGATGAGGCAGATGAAGAAGATATGGATGTTGAAGACGCCAGTGATGAACAGATTGCCAATGCCCTAGCTGTTGCACAAGCACTTAGAAAATC
TTCTGAGACCACGAATCTAAAAACCAAATATGACACATTGCTGAAG
Protein sequenceShow/hide protein sequence
MDVEDASDEQIANALAVAQALRKSSETTNLKTKYDTLLK