; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C027473 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C027473
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGirdin-like
Genome locationchr05:24026436..24026845
RNA-Seq ExpressionMELO3C027473
SyntenyMELO3C027473
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]2.0e-5488.39Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        M VWDPTYPRKEAWL FFAK TSENVIWKAQWMPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDCQGKKRQAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTK
        CAWKS+RKIK K
Subjt:  CAWKSVRKIKTK

KAA0044912.1 girdin-like [Cucumis melo var. makuwa]1.7e-5387.5Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        M VWD TYPRKEAWL FFAK TSENVIWKAQWMPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDCQGKKRQAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTK
        CAWKS+RKIK K
Subjt:  CAWKSVRKIKTK

KAA0046902.1 girdin-like [Cucumis melo var. makuwa]4.8e-5386.61Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        M VWDPTYPRKEAWL FFAK TSENVIWKAQWMPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDCQGKK QAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTK
        C WKS+RKIK K
Subjt:  CAWKSVRKIKTK

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]2.6e-5477.1Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        MTVWDPTYPRKEAWL FFAK TSENVIWKAQWMPLKA IYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPT N+QESDFSY+PEDCQGKKRQAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTKDITKELLVGTRHGRQTKRR
        CAWKS+RKIK K   + +  G    +  KR+
Subjt:  CAWKSVRKIKTKDITKELLVGTRHGRQTKRR

TYK16558.1 girdin-like [Cucumis melo var. makuwa]1.7e-5387.5Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        M VWD TYPRKEAWL FFAK TSENVIWKAQWMPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDCQGKKRQAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTK
        CAWKS+RKIK K
Subjt:  CAWKSVRKIKTK

TrEMBL top hitse value%identityAlignment
A0A5A7T5S7 Girdin-like9.5e-5588.39Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        M VWDPTYPRKEAWL FFAK TSENVIWKAQWMPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDCQGKKRQAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTK
        CAWKS+RKIK K
Subjt:  CAWKSVRKIKTK

A0A5A7TNJ1 Girdin-like8.1e-5487.5Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        M VWD TYPRKEAWL FFAK TSENVIWKAQWMPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDCQGKKRQAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTK
        CAWKS+RKIK K
Subjt:  CAWKSVRKIKTK

A0A5A7UL51 Girdin-like1.2e-5477.1Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        MTVWDPTYPRKEAWL FFAK TSENVIWKAQWMPLKA IYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPT N+QESDFSY+PEDCQGKKRQAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTKDITKELLVGTRHGRQTKRR
        CAWKS+RKIK K   + +  G    +  KR+
Subjt:  CAWKSVRKIKTKDITKELLVGTRHGRQTKRR

A0A5D3BYI1 Girdin-like2.3e-5386.61Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        M VWDPTYPRKEAWL FFAK TSENVIWKAQWMPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDCQGKK QAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTK
        C WKS+RKIK K
Subjt:  CAWKSVRKIKTK

A0A5D3CZ50 Girdin-like8.1e-5487.5Show/hide
Query:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV
        M VWD TYPRKEAWL FFAK TSENVIWKAQWMPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDCQGKKRQAV
Subjt:  MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAV

Query:  CAWKSVRKIKTK
        CAWKS+RKIK K
Subjt:  CAWKSVRKIKTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTTTGGGATCCAACATATCCAAGGAAGGAAGCTTGGTTGTTTTTCTTTGCAAAACCAACTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAAGGC
GGTGATATATAGATGCAGAGATTTTCATGGTGTGTCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGCTTTTTGTCAGGTGTGGCTCAAACAGTTTA
TACCACCAACTCATAATATGCAAGAGTCTGACTTTTCATACCATCCTGAAGATTGCCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTGTAAGGAAGATAAAG
ACAAAGGACATTACGAAGGAGTTACTAGTGGGTACGAGGCATGGCAGACAAACAAAAAGAAGAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTTTGGGATCCAACATATCCAAGGAAGGAAGCTTGGTTGTTTTTCTTTGCAAAACCAACTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAAGGC
GGTGATATATAGATGCAGAGATTTTCATGGTGTGTCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGCTTTTTGTCAGGTGTGGCTCAAACAGTTTA
TACCACCAACTCATAATATGCAAGAGTCTGACTTTTCATACCATCCTGAAGATTGCCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTGTAAGGAAGATAAAG
ACAAAGGACATTACGAAGGAGTTACTAGTGGGTACGAGGCATGGCAGACAAACAAAAAGAAGAATATAATAGATATCTCA
Protein sequenceShow/hide protein sequence
MTVWDPTYPRKEAWLFFFAKPTSENVIWKAQWMPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAVCAWKSVRKIK
TKDITKELLVGTRHGRQTKRRI