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MELO3C027603 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C027603
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:17269646..17271898
RNA-Seq ExpressionMELO3C027603
SyntenyMELO3C027603
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035073.1 uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa]3.9e-1342.86Show/hide
Query:  NSDIYLVLFDEENRAVGFHSKS---GGPWFFL-DKLKRSCARDSGSVSVLRVICVYARGIRFICLQ----------------------------------
        + D + ++F       GF   S   GG    + +KLKRSCARDSGS SVLRVICVYARGIRFICLQ                                  
Subjt:  NSDIYLVLFDEENRAVGFHSKS---GGPWFFL-DKLKRSCARDSGSVSVLRVICVYARGIRFICLQ----------------------------------

Query:  ----------------SRQIQVQKSIIRRLHAIFRSKVAG
                        SRQIQVQKS++RRLHAIFRSKVAG
Subjt:  ----------------SRQIQVQKSIIRRLHAIFRSKVAG

KAA0042134.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.0e-1860.87Show/hide
Query:  DKLKRSCARDSGSVSVLRVICVYARGIRFICLQ-----------------------SRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGS
        DKLKRSCA DSGS SVLRVICVYARGIRFICLQ                       S  ++VQKS++R+LHAIFRSKVAGSPGGGVT  + S
Subjt:  DKLKRSCARDSGSVSVLRVICVYARGIRFICLQ-----------------------SRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGS

KAA0056192.1 hypothetical protein E6C27_scaffold431G00190 [Cucumis melo var. makuwa]9.0e-1089.47Show/hide
Query:  QSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR
        QSRQIQVQK+++RR HAIFRSKVAGSPGGGVTLHFGSR
Subjt:  QSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR

KAA0056677.1 hypothetical protein E6C27_scaffold73G00010 [Cucumis melo var. makuwa]1.4e-1094.74Show/hide
Query:  QSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR
        QSRQIQVQKS++RRLHAIFRSKVAGSPGGGVTLHFGSR
Subjt:  QSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.6e-1246.43Show/hide
Query:  DKLKRSCARDSGSVSVLRVICVYARGIRFICL-------------------------------------------------------QSRQIQVQKSIIR
        +KLKRSCARDSGS SVLRVICVYARGIRFICL                                                       QSRQIQVQK+++R
Subjt:  DKLKRSCARDSGSVSVLRVICVYARGIRFICL-------------------------------------------------------QSRQIQVQKSIIR

Query:  RLHAIFRSKVAG
        RLHAIFRSKVAG
Subjt:  RLHAIFRSKVAG

TrEMBL top hitse value%identityAlignment
A0A5A7SX02 CCHC-type domain-containing protein1.9e-1342.86Show/hide
Query:  NSDIYLVLFDEENRAVGFHSKS---GGPWFFL-DKLKRSCARDSGSVSVLRVICVYARGIRFICLQ----------------------------------
        + D + ++F       GF   S   GG    + +KLKRSCARDSGS SVLRVICVYARGIRFICLQ                                  
Subjt:  NSDIYLVLFDEENRAVGFHSKS---GGPWFFL-DKLKRSCARDSGSVSVLRVICVYARGIRFICLQ----------------------------------

Query:  ----------------SRQIQVQKSIIRRLHAIFRSKVAG
                        SRQIQVQKS++RRLHAIFRSKVAG
Subjt:  ----------------SRQIQVQKSIIRRLHAIFRSKVAG

A0A5A7TFC5 Reverse transcriptase4.3e-1860.87Show/hide
Query:  DKLKRSCARDSGSVSVLRVICVYARGIRFICLQ-----------------------SRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGS
        DKLKRSCA DSGS SVLRVICVYARGIRFICLQ                       S  ++VQKS++R+LHAIFRSKVAGSPGGGVT  + S
Subjt:  DKLKRSCARDSGSVSVLRVICVYARGIRFICLQ-----------------------SRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGS

A0A5A7UJY2 Uncharacterized protein4.3e-1089.47Show/hide
Query:  QSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR
        QSRQIQVQK+++RR HAIFRSKVAGSPGGGVTLHFGSR
Subjt:  QSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR

A0A5A7UNA3 Reverse transcriptase4.6e-1246.43Show/hide
Query:  DKLKRSCARDSGSVSVLRVICVYARGIRFICL-------------------------------------------------------QSRQIQVQKSIIR
        +KLKRSCARDSGS SVLRVICVYARGIRFICL                                                       QSRQIQVQK+++R
Subjt:  DKLKRSCARDSGSVSVLRVICVYARGIRFICL-------------------------------------------------------QSRQIQVQKSIIR

Query:  RLHAIFRSKVAG
        RLHAIFRSKVAG
Subjt:  RLHAIFRSKVAG

A0A5A7UPX3 Uncharacterized protein6.7e-1194.74Show/hide
Query:  QSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR
        QSRQIQVQKS++RRLHAIFRSKVAGSPGGGVTLHFGSR
Subjt:  QSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACGTTGGAGCAAATTCGGATATTTATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCCCTGGTTTTTCTTGGACAA
GTTAAAGAGGTCATGTGCGCGCGATTCTGGAAGTGTTTCTGTTTTGAGGGTTATATGTGTTTATGCACGGGGAATCAGATTTATATGTCTTCAGAGTCGACAGATACAGG
TACAGAAAAGCATTATTCGTCGGCTTCACGCCATCTTTCGATCTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACACTCCACTTCGGGTCACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACGTTGGAGCAAATTCGGATATTTATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCCCTGGTTTTTCTTGGACAA
GTTAAAGAGGTCATGTGCGCGCGATTCTGGAAGTGTTTCTGTTTTGAGGGTTATATGTGTTTATGCACGGGGAATCAGATTTATATGTCTTCAGAGTCGACAGATACAGG
TACAGAAAAGCATTATTCGTCGGCTTCACGCCATCTTTCGATCTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACACTCCACTTCGGGTCACGGTGAGTCTTCGATATT
GGAGTAAGACTGGGTCCTATCTTTCGTTCCTTGAAGGTGATAGGGGTTTGACGCTCAAGTTCACGGTCCCACGGCAAGTTCATTTGGGAATAGCTCCCTTTACTCGGGTG
GATCTGTTGAGCGTGGACTCGATCGAGGGGCATAACCAAGTATCAGGTAAGGGTTTTCCTACTACTGGACCTCGGATCGAGGCTGGAAACGTAGTAATCCA
Protein sequenceShow/hide protein sequence
MKNVGANSDIYLVLFDEENRAVGFHSKSGGPWFFLDKLKRSCARDSGSVSVLRVICVYARGIRFICLQSRQIQVQKSIIRRLHAIFRSKVAGSPGGGVTLHFGSR