; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C027687 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C027687
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr02:4596976..4599227
RNA-Seq ExpressionMELO3C027687
SyntenyMELO3C027687
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048134.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-0468.63Show/hide
Query:  KTHHLLREKKNKKKKRKKKGQTNPNPSRRS---RRSSADHPNRQPIFQPRR
        KTHHLL  KK KK       QTNPNPSR+S   RRSSADHP+RQPIFQPR+
Subjt:  KTHHLLREKKNKKKKRKKKGQTNPNPSRRS---RRSSADHPNRQPIFQPRR
TrEMBL top hitse value%identityAlignment
A0A5A7TYM4 Ty3-gypsy retrotransposon protein7.4e-0568.63Show/hide
Query:  KTHHLLREKKNKKKKRKKKGQTNPNPSRRS---RRSSADHPNRQPIFQPRR
        KTHHLL  KK KK       QTNPNPSR+S   RRSSADHP+RQPIFQPR+
Subjt:  KTHHLLREKKNKKKKRKKKGQTNPNPSRRS---RRSSADHPNRQPIFQPRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGACCTAGTTGGGACCCTTGGGACCCATGCGCCTTAAAAAAAACCCATCATCTTCTTCGTGAAAAAAAAAACAAAAAGAAAAAAAGAAAAAAAAAAGGGCAAAC
AAACCCTAACCCTAGTAGAAGAAGCCGCCGCTCCTCCGCAGACCACCCGAACCGACAGCCAATTTTCCAGCCGCGTCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGACCTAGTTGGGACCCTTGGGACCCATGCGCCTTAAAAAAAACCCATCATCTTCTTCGTGAAAAAAAAAACAAAAAGAAAAAAAGAAAAAAAAAAGGGCAAAC
AAACCCTAACCCTAGTAGAAGAAGCCGCCGCTCCTCCGCAGACCACCCGAACCGACAGCCAATTTTCCAGCCGCGTCGGTGATCCGTCCAAGCCGATCCGCGTACGCCGA
GCGTCCGCCGCACAGCTTGTCTCCCGCAGCCATCACCCGAAGCCGAACCACCCGCGTTATCCTTCGCGATCCGCAGCCGATCCGTTTGTAGCCGCCGCGTGAAACTTCGT
CAGCCGCTCCGTGCCCGCGCGCCGCCCCGAGTCGCAAACCGATCCCGCGTCCGCATACCGCTCTGTGCCCGCGCGCCGCCTCGAGTCGCAAACCGAGCCCGCGCGCGCCC
AGCGCTCTTCGCGTGCAAGCCGCGTCACCTGCACCGTAAGCTGAGCTGCGCCTCCCTTCTATCGCAAGCCGAGCGCACGCGCACAGTTTCTGCGTCGAGCCGAGCCGAGC
CTAGTCGCGCTTGCGCCAAGACCTCGTTGCTTGGAAAGCACACTTGTCTTGCGGTTAGGACTCGTCAAGTAAATCTCCAGCCTATTAGAGTCGTAGCTGCATGGGTGTCC
TTCGGGATCACCACTTATTTAGGATTGTGTGGTCCGACGGGACGCCAGTCTAGCATGGTTATAGATATGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGATTGTCTT
AGTGTTACCCCCGGGTTCGCTACAGACCAGCATTTATCCGATGGGTTTTGTGGGCTTCGACCGGGTCATTGAACCCAATAAATTGGATTTAGGCTTTATTTAA
Protein sequenceShow/hide protein sequence
MWGPSWDPWDPCALKKTHHLLREKKNKKKKRKKKGQTNPNPSRRSRRSSADHPNRQPIFQPRR