; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C027761 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C027761
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr07:19319255..19320541
RNA-Seq ExpressionMELO3C027761
SyntenyMELO3C027761
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057608.1 transposase [Cucumis melo var. makuwa]3.1e-3890.43Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        MARDILAIPVSTVASES F+T GRVVDSSRCSLAPKT+EALICTQNWLNSDPIHLQF HELEE  KFEEGFRVVMENEKELEDLP F+KLSIID
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

TYK16305.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.8e-3898.82Show/hide
Query:  VSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        VSTVASESGFNTRGRVVDSSRCSLAPKTVE LICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
Subjt:  VSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

TYK16593.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]8.2e-3991.49Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        MARDILAIPVSTVASES F+T GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQF HELEE  KFEEGFRVVMENEKELEDLPDF+KLSI D
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

TYK20578.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]8.2e-3991.49Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        MARDILAIPVSTVASES F+T GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQF HELEE  KFEEGFRVVMENEKELEDLPDF+KLSI D
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

TYK23433.1 putative transposase [Cucumis melo var. makuwa]8.2e-3991.49Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        MARDILAIPVSTVASES F+T GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQF HELEE  KFEEGFRVVMENEKELEDLPDF+KLSI D
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

TrEMBL top hitse value%identityAlignment
A0A5A7UR54 Transposase1.5e-3890.43Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        MARDILAIPVSTVASES F+T GRVVDSSRCSLAPKT+EALICTQNWLNSDPIHLQF HELEE  KFEEGFRVVMENEKELEDLP F+KLSIID
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like4.0e-3991.49Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        MARDILAIPVSTVASES F+T GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQF HELEE  KFEEGFRVVMENEKELEDLPDF+KLSI D
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

A0A5D3CXV1 Zinc finger BED domain-containing protein RICESLEEPER 3-like8.9e-3998.82Show/hide
Query:  VSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        VSTVASESGFNTRGRVVDSSRCSLAPKTVE LICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
Subjt:  VSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like4.0e-3991.49Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        MARDILAIPVSTVASES F+T GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQF HELEE  KFEEGFRVVMENEKELEDLPDF+KLSI D
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

A0A5D3DIL8 Putative transposase4.0e-3991.49Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID
        MARDILAIPVSTVASES F+T GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQF HELEE  KFEEGFRVVMENEKELEDLPDF+KLSI D
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase1.6e-0862.5Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWL
        +ARD+LAI VSTVASES F+  GRVVD  R  L  + VEALICT++W+
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWL

P08770 Putative AC transposase1.6e-0862.5Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWL
        +ARD+LAI VSTVASES F+  GRVVD  R  L  + VEALICT++W+
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWL

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 25.6e-0649.09Show/hide
Query:  MARDILAIPVSTVASESGFNTRG---RVVDSSRCSLAPKTVEALICTQNWLNSDP
        MARDILAIP+S V+S +   + G   R++D  R SL P+ VEAL+C ++WL   P
Subjt:  MARDILAIPVSTVASESGFNTRG---RVVDSSRCSLAPKTVEALICTQNWLNSDP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 34.3e-0648.21Show/hide
Query:  MARDILAIPVSTVASESGF----NTRGRVVDSSRCSLAPKTVEALICTQNWLNSDP
        MARD+LAIP+S V+S S       T  +++D  R SL P+TVEAL C ++WL   P
Subjt:  MARDILAIPVSTVASESGF----NTRGRVVDSSRCSLAPKTVEALICTQNWLNSDP

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER1.9e-0654.17Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWL
        MARDIL+IPVS  A +  F+   R +D  + SL P+TVEALIC + WL
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWL

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.4e-0754.17Show/hide
Query:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWL
        MARDIL+IPVS  A +  F+   R +D  + SL P+TVEALIC + WL
Subjt:  MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGAGATATTTTGGCTATTCCAGTTTCTACTGTAGCGTCTGAGTCGGGTTTTAATACTAGAGGACGTGTTGTTGACTCATCACGCTGCTCTTTGGCTCCTAAAAC
AGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATACATCTTCAATTTTATCATGAATTGGAAGAAGTTTTAAAATTTGAAGAAGGATTCCGGGTGG
TTATGGAGAATGAAAAGGAGCTTGAAGACCTTCCAGATTTTGAAAAGTTGTCAATTATCGATTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAAGCTTTTGGTAGATTAGAAGATGAAGATGCCTCGTATAGACATGATATGTCACCGAATAAGGAAGATTGGACAAATGCTAGGATGTTAATACGGTTTTTAAAAGT
ATTTTATGATGTGACATTGAAGATTTCAGGCTCTTTGTATACTACTTCGAACTTGGTTTTCCATCAAATTACAGTGGTTTAGAATTGTATACGTTTGAATGCGGGTAGTG
CAAATGCATTGTTAGTTGGAATGACTAATAACTTTGAGAAACATTAGGGAAACAATGAAAAGAATAATTTGTTGTTGTATGTTGCTATTGTGTTTGATCCTTGAAAGAAA
TTAAGATTTGTATCTTTTTGTTTGAAATTTTTTTTTGGTCCCGAGGTTGTTGAATCCATGGGAAATGTAGTGGAACAATGTTGTAGATGTCTCTTTCATGAGTATAGTAT
TACTTGAAGTGGGAGTAGACAAGGATGTAGTAGTACTAGTACAACTAGTACACAAACTGTTTCAGGCTTGGATGCTAATATTGATTTTGATTCAAATGAAAAGGTGGGTG
AAGATTTTGTCTACGACACGATTGTTGAGGAATTTGAAGATGATGCTACTACACCTTTTGAACAGGAGTCATCGGAGATTGATATCTATTTGTTGGAAGCCAATGTTAGG
ACCGAAGGTGATTTTGACATACTATAGTGGTGGAAGATGAAATGTGATTGATTTGAGGTTCTTAGTCATATGGCTAGAGATATTTTGGCTATTCCAGTTTCTACTGTAGC
GTCTGAGTCGGGTTTTAATACTAGAGGACGTGTTGTTGACTCATCACGCTGCTCTTTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTG
ATCCAATACATCTTCAATTTTATCATGAATTGGAAGAAGTTTTAAAATTTGAAGAAGGATTCCGGGTGGTTATGGAGAATGAAAAGGAGCTTGAAGACCTTCCAGATTTT
GAAAAGTTGTCAATTATCGATTAAGCGATTACTAACTAATTCTGATCCAAGACTTGTAATATTTCTATCGACTAGACTATCATAGTGTTTCTGTTTCATACTTTGGTTGT
ATTTGTGACTTTTAATAGTAAGGTGGTGAAGTGAATTGAACTTGGATGTTTCTAATTTCATTTTGGTAGTATGTTTAGATTCTTATTTT
Protein sequenceShow/hide protein sequence
MARDILAIPVSTVASESGFNTRGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFYHELEEVLKFEEGFRVVMENEKELEDLPDFEKLSIID