; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C028011 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028011
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr09:18750797..18751970
RNA-Seq ExpressionMELO3C028011
SyntenyMELO3C028011
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042974.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-10091.87Show/hide
Query:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD
        +KKCIV EK+VFDDW  SHPA KGLLNKSFVHYDELSYVFGKDRATGGR ESFADIGSNDPA YDAFAADAA DTNFSPMYSPGLNMS DDLME RTAR 
Subjt:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD

Query:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY
        SERRNVS  SKRKR GHATDSGDIVRTAIEYGNEQLHRIAEW ILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDD+KAFLEVPDNMKYPY
Subjt:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY

Query:  CSIILQENR
        CSIILQENR
Subjt:  CSIILQENR

KAA0046363.1 retrotransposon protein [Cucumis melo var. makuwa]3.9e-11399.53Show/hide
Query:  MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA
        MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA
Subjt:  MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA

Query:  RDSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY
        R SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY
Subjt:  RDSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY

Query:  PYCSIILQENR
        PYCSIILQENR
Subjt:  PYCSIILQENR

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]8.7e-10591.47Show/hide
Query:  MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA
        MMKKKCI+ EK+VFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGR ESFADIGSNDPA YDAFAAD  +DT+F PMYSPGLNMSPDDLMETRTA
Subjt:  MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA

Query:  RDSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY
        R SERRNVSS SKRKR GHATDSGDIVRTA+EYGNEQLHRIAEWPILQRQDAT+TRQEIVRQLE IPELTLMDRCRLMRI+MRNVDD+KAFLEVPDNMKY
Subjt:  RDSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY

Query:  PYCSIILQENR
        PYCSIILQENR
Subjt:  PYCSIILQENR

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-10391.39Show/hide
Query:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD
        +KKCI+ EK+VFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGR ESFADIGSNDPA YDAFAAD   DT+F PMYSPGLNMSPDDLMETRTAR 
Subjt:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD

Query:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY
        SERRNVSS SK KR GHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRI+MRNVDD+KAFL+VPDNMKYPY
Subjt:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY

Query:  CSIILQENR
        CSIILQENR
Subjt:  CSIILQENR

KAA0065737.1 retrotransposon protein [Cucumis melo var. makuwa]5.3e-10291.87Show/hide
Query:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD
        +KKCIV EK+VFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGR ESFADIGSNDP  YDAFAADA  DT+F PMYSPGLNMSPDDLMETRTAR 
Subjt:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD

Query:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY
        SERRNVSS SKRKR GHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ+IVRQLEAIPELTLMDRCRLMRILMRNVDD+KAFLEVPDNMKYPY
Subjt:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY

Query:  CSIILQENR
        CSIILQENR
Subjt:  CSIILQENR

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein8.2e-10191.39Show/hide
Query:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD
        +KKCIV EK+VFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGR ESFADIGSN+P  YDAFAADA  DT+FSPMYS GLNMSPDDLMETRTAR 
Subjt:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD

Query:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY
        SERRNVSS SKRKR GHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIV+QLEAIPELTLMDRCRLMRILMRNVDD+KAFLEVPDNMKYPY
Subjt:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY

Query:  CSIILQENR
        CSIILQENR
Subjt:  CSIILQENR

A0A5A7TS39 Retrotransposon protein1.9e-11399.53Show/hide
Query:  MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA
        MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA
Subjt:  MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA

Query:  RDSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY
        R SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY
Subjt:  RDSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY

Query:  PYCSIILQENR
        PYCSIILQENR
Subjt:  PYCSIILQENR

A0A5A7TYQ6 Retrotransposon protein4.2e-10591.47Show/hide
Query:  MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA
        MMKKKCI+ EK+VFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGR ESFADIGSNDPA YDAFAAD  +DT+F PMYSPGLNMSPDDLMETRTA
Subjt:  MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTA

Query:  RDSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY
        R SERRNVSS SKRKR GHATDSGDIVRTA+EYGNEQLHRIAEWPILQRQDAT+TRQEIVRQLE IPELTLMDRCRLMRI+MRNVDD+KAFLEVPDNMKY
Subjt:  RDSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKY

Query:  PYCSIILQENR
        PYCSIILQENR
Subjt:  PYCSIILQENR

A0A5A7U4M2 Retrotransposon protein3.0e-10391.39Show/hide
Query:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD
        +KKCI+ EK+VFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGR ESFADIGSNDPA YDAFAAD   DT+F PMYSPGLNMSPDDLMETRTAR 
Subjt:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD

Query:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY
        SERRNVSS SK KR GHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRI+MRNVDD+KAFL+VPDNMKYPY
Subjt:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY

Query:  CSIILQENR
        CSIILQENR
Subjt:  CSIILQENR

A0A5A7VF53 Retrotransposon protein2.6e-10291.87Show/hide
Query:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD
        +KKCIV EK+VFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGR ESFADIGSNDP  YDAFAADA  DT+F PMYSPGLNMSPDDLMETRTAR 
Subjt:  KKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARD

Query:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY
        SERRNVSS SKRKR GHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ+IVRQLEAIPELTLMDRCRLMRILMRNVDD+KAFLEVPDNMKYPY
Subjt:  SERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPY

Query:  CSIILQENR
        CSIILQENR
Subjt:  CSIILQENR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGAAAAAATGCATCGTCACTGAGAAACAAGTCTTTGACGATTGGGTAAAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTAT
GACGAACTATCTTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGTTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTGCTAGGTATGACGCATTTGCT
GCTGACGCTGCGGCAGATACAAACTTCTCCCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACCAGAACCGCTAGGGACAGTGAACGG
AGGAATGTTTCAAGCAGGTCTAAGCGGAAACGTATAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATCGAGTACGGAAATGAACAACTTCATCGC
ATTGCTGAATGGCCTATCCTACAACGTCAAGACGCAACCCAAACACGTCAAGAGATTGTTCGACAGTTGGAGGCCATCCCCGAGCTCACATTGATGGATAGGTGT
CGCTTAATGCGTATACTTATGCGTAACGTCGATGACATAAAAGCTTTCCTTGAAGTTCCCGACAACATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAAC
CGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTTCATCAAGACTACCTAAACATACTTGGACTAAAGAGGAAGAGGCAAGCCTCGTGGAGTGCCTCGTGGGGTTGGTCAATGCTGGTGGGTGGAGGTCC
AACAATGGGACCTTTCGCCCCGGGTACTTAAATCAGCTGGCGAGAATGATGGCCTTCAAGATCCTAGGTTGTAATATCCATGCTTCAACCTTCGATAGCCGAATC
AAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGTGGTTTTGGGTGGAATGATGAAGAAAAAATGCATCGTCACTGAGAAACAAGTCTTTGACGATTGGGTAA
AGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTATCTTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGTTGAGA
GTTTTGCGGACATTGGGTCAAACGATCCTGCTAGGTATGACGCATTTGCTGCTGACGCTGCGGCAGATACAAACTTCTCCCCAATGTACAGTCCGGGATTGAACA
TGTCGCCTGATGATTTGATGGAAACCAGAACCGCTAGGGACAGTGAACGGAGGAATGTTTCAAGCAGGTCTAAGCGGAAACGTATAGGACATGCCACAGATAGTG
GGGACATAGTTCGTACTGCCATCGAGTACGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGACGCAACCCAAACACGTCAAGAGA
TTGTTCGACAGTTGGAGGCCATCCCCGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATAAAAGCTTTCCTTGAAG
TTCCCGACAACATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTGGACT
ATATGTTCTTCTTCTAACTTGTTATGTCTTATTATATAACGAACTTGAAATTCTATTGAAGTTAATTAGTTTGTATTTTCATTTCGCTTTCAAATGTAATGGTAT
CAATTGTTGTATTATCCTATTAATGTA
Protein sequenceShow/hide protein sequence
MMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARDSER
RNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPYCSIILQEN
R