| GenBank top hits | e value | %identity | Alignment |
|---|
| ASY96752.1 RNA polymerase beta'' subunit [Cucumis melo var. momordica] | 4.2e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| QHB75953.1 RNA polymerase beta II subunit [Cucumis melo subsp. melo] | 4.2e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| QJF46373.1 RNA polymerase beta'' subunit [Cucumis melo] | 4.2e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| YP_004841773.1 RNA polymerase beta'' subunit [Cucumis melo subsp. melo] | 4.2e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| YP_009751896.1 RNA polymerase beta'' subunit [Cyclanthera pedata] | 9.4e-71 | 99.3 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKA+LNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A249RXP5 DNA-directed RNA polymerase subunit beta'' | 2.1e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| A0A249RYA1 DNA-directed RNA polymerase subunit beta'' | 2.1e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| A0A249RYY9 DNA-directed RNA polymerase subunit beta'' | 2.1e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| A0A249RZW9 DNA-directed RNA polymerase subunit beta'' | 2.1e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| A0A286NFX2 DNA-directed RNA polymerase subunit beta'' | 2.1e-71 | 100 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A6MM26 DNA-directed RNA polymerase subunit beta'' | 5.4e-69 | 94.29 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGV+IHNRHIEIIVRQITSKVLVSE+GMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGIT+ASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE
RIDWL+GLKENVVLGG+IPVGTGF+ L HRSRQHNNIPLE
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE
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| A6MMB2 DNA-directed RNA polymerase subunit beta'' | 1.6e-68 | 93.57 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRA+LLGIT+ SLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE
RIDWL+GLKENVVLGGMIPVGTGF+ L HRSRQHNN PLE
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE
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| Q09G56 DNA-directed RNA polymerase subunit beta'' | 5.4e-69 | 94.29 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGL RAERTGRALEEAICYRAVLLGIT+ASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE
RIDWL+GLKENVVLGGMIPVGTGF+ L HRSR+HNNIPLE
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE
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| Q0G9M9 DNA-directed RNA polymerase subunit beta'' | 3.2e-69 | 94.29 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEE ICYRA+LLGIT+ASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE
RIDWL+GLKENVVLGGMIPVGTGF+ L HRSRQHNNIPLE
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE
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| Q4VZP3 DNA-directed RNA polymerase subunit beta'' | 4.7e-73 | 99.3 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE P
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLEPP
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G35800.1 RNA polymerase II large subunit | 6.0e-07 | 38.03 | Show/hide |
Query: EAICYRAVLLGITKASLNTQSF--ISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFREL
+ + YR L+ IT+ +N + SF+ET +L AA D LRG+ EN++LG + P+GTG EL
Subjt: EAICYRAVLLGITKASLNTQSF--ISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFREL
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| AT5G60040.1 nuclear RNA polymerase C1 | 3.3e-05 | 31.17 | Show/hide |
Query: LEEAICYRAVLLGITKASLN--TQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS
L + + YR +LGI + + +S + +ASF+ T L AA G++D + G+ E V++G + +GTG ++ R+
Subjt: LEEAICYRAVLLGITKASLN--TQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS
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| AT5G60040.2 nuclear RNA polymerase C1 | 3.3e-05 | 31.17 | Show/hide |
Query: LEEAICYRAVLLGITKASLN--TQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS
L + + YR +LGI + + +S + +ASF+ T L AA G++D + G+ E V++G + +GTG ++ R+
Subjt: LEEAICYRAVLLGITKASLN--TQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS
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| ATCG00170.1 DNA-directed RNA polymerase family protein | 8.3e-65 | 90.07 | Show/hide |
Query: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
IQKVYRSQGV+IHNRHIEIIVRQITSKVLVSE+GMSNVF PGELIGLLRAERTGRALEEAICYRAVLLGIT+ASLNTQSFISEASFQETARVLAKAALRG
Subjt: IQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRG
Query: RIDWLRGLKENVVLGGMIPVGTGFRE-LAHRSRQHNNIPLE
RIDWL+GLKENVVLGG+IP GTGF + L H SRQH NI LE
Subjt: RIDWLRGLKENVVLGGMIPVGTGFRE-LAHRSRQHNNIPLE
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