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MELO3C028024 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028024
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCoatomer, beta' subunit
Genome locationchr10:13353334..13353738
RNA-Seq ExpressionMELO3C028024
SyntenyMELO3C028024
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0030117 - membrane coat (cellular component)
GO:0030663 - COPI-coated vesicle membrane (cellular component)
GO:0005198 - structural molecule activity (molecular function)
InterPro domainsIPR006692 - Coatomer, WD associated region


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062345.1 coatomer subunit beta'-2-like isoform X3 [Cucumis melo var. makuwa]4.4e-3494.81Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        MKSKELSLFYV PLLAEHIYGGTLLAMCTNDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

XP_008447491.1 PREDICTED: coatomer subunit beta'-2-like isoform X2 [Cucumis melo]7.5e-2693.55Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AEHIYGGTLLAMC+NDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

XP_008460512.2 PREDICTED: coatomer subunit beta'-1-like [Cucumis melo]4.4e-3494.81Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        MKSKELSLFYV PLLAEHIYGGTLLAMCTNDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

XP_016901863.1 PREDICTED: coatomer subunit beta'-1-like [Cucumis melo]2.2e-3392.21Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        MKSKELSLFYVVPLL EHIYGGTLLAMC+NDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIA+DTSFYILKYN
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

XP_021829139.1 coatomer subunit beta'-3 [Prunus avium]7.5e-2693.55Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AEHIYGGTLLAMC+NDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

TrEMBL top hitse value%identityAlignment
A0A1S3CDW5 coatomer subunit beta'-1-like2.1e-3494.81Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        MKSKELSLFYV PLLAEHIYGGTLLAMCTNDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

A0A1S4E0W2 coatomer subunit beta'-1-like1.1e-3392.21Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        MKSKELSLFYVVPLL EHIYGGTLLAMC+NDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIA+DTSFYILKYN
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

A0A5A7V8X3 Coatomer subunit beta'-2-like isoform X32.1e-3494.81Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        MKSKELSLFYV PLLAEHIYGGTLLAMCTNDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

A0A6P3YZB0 Coatomer subunit beta'3.6e-2693.55Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AEHIYGGTLLAMC+NDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

A0A6P3YZC2 Coatomer subunit beta'3.6e-2693.55Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AEHIYGGTLLAMC+NDFICFYDWAE RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

SwissProt top hitse value%identityAlignment
Q5VQ78 Coatomer subunit beta'-16.0e-2676.39Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYNVRILVMPLRS
        AE I+GG LLAMC++DFICFYDWA+ RLI RIDVNVKNLYWADSGD VAIASDTSFYILKYN  ++   L S
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYNVRILVMPLRS

Q6H8D5 Coatomer subunit beta'-21.6e-2683.08Show/hide
Query:  PLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        P  AE I+GG LLAMCTNDFICF+DWAE R+I RIDVNVKNLYWADSGD V IASDTSFYILKYN
Subjt:  PLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

Q6H8D6 Putative coatomer subunit beta'-31.6e-2683.08Show/hide
Query:  PLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        P  AE I+GG LLAMCTNDFICF+DWAE R+I RIDVNVKNLYWADSGD V IASDTSFYILKYN
Subjt:  PLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

Q8L828 Coatomer subunit beta'-31.0e-2585.48Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AE I+GGTLLAMC+NDFICFYDWAE RLI +IDV VKNLYWA+SGD VAIASDTSFYILKYN
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

Q9CAA0 Coatomer subunit beta'-14.6e-2685.48Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AEHI+GGTLL MC++DFICFYDWAE RLI RIDV VKNLYWADSGD VAIASDTSFYILK+N
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

Arabidopsis top hitse value%identityAlignment
AT1G79990.1 structural molecules3.2e-2785.48Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AEHI+GGTLL MC++DFICFYDWAE RLI RIDV VKNLYWADSGD VAIASDTSFYILK+N
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

AT1G79990.3 structural molecules3.2e-2785.48Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AEHI+GGTLL MC++DFICFYDWAE RLI RIDV VKNLYWADSGD VAIASDTSFYILK+N
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

AT1G79990.5 structural molecules3.2e-2785.48Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AEHI+GGTLL MC++DFICFYDWAE RLI RIDV VKNLYWADSGD VAIASDTSFYILK+N
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

AT3G15980.1 Coatomer, beta' subunit7.2e-2785.48Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AE I+GGTLLAMC+NDFICFYDWAE RLI +IDV VKNLYWA+SGD VAIASDTSFYILKYN
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN

AT3G15980.2 Coatomer, beta' subunit7.2e-2785.48Show/hide
Query:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN
        AE I+GGTLLAMC+NDFICFYDWAE RLI +IDV VKNLYWA+SGD VAIASDTSFYILKYN
Subjt:  AEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGTAAGGAACTATCATTATTTTATGTTGTTCCATTGTTAGCCGAGCACATCTATGGAGGAACTCTGTTAGCCATGTGTACCAATGATTTTATATGTTTCTATGA
TTGGGCAGAGAGCAGACTGATCAGCCGTATTGATGTAAATGTGAAGAACCTTTATTGGGCTGATAGTGGTGATTTTGTGGCAATAGCCAGTGATACATCATTTTATATCC
TGAAGTACAATGTAAGAATACTTGTTATGCCGTTAAGAAGTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGTAAGGAACTATCATTATTTTATGTTGTTCCATTGTTAGCCGAGCACATCTATGGAGGAACTCTGTTAGCCATGTGTACCAATGATTTTATATGTTTCTATGA
TTGGGCAGAGAGCAGACTGATCAGCCGTATTGATGTAAATGTGAAGAACCTTTATTGGGCTGATAGTGGTGATTTTGTGGCAATAGCCAGTGATACATCATTTTATATCC
TGAAGTACAATGTAAGAATACTTGTTATGCCGTTAAGAAGTCGATGAAGTTCAATTGTTTTCCTTACACAATATGGATCTGAATCTTGCTTCATTTG
Protein sequenceShow/hide protein sequence
MKSKELSLFYVVPLLAEHIYGGTLLAMCTNDFICFYDWAESRLISRIDVNVKNLYWADSGDFVAIASDTSFYILKYNVRILVMPLRSR