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MELO3C028045 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028045
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr05:15709704..15709961
RNA-Seq ExpressionMELO3C028045
SyntenyMELO3C028045
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032760.1 hypothetical protein E6C27_scaffold708G00020 [Cucumis melo var. makuwa]6.4e-1493.02Show/hide
Query:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        GYTQYNNVYKLYDVVGP QHSHRLCR+GARPALTTASLLRST+
Subjt:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
KAA0039545.1 hypothetical protein E6C27_scaffold744G00040 [Cucumis melo var. makuwa]2.4e-1388.64Show/hide
Query:  VGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        +GYTQYNNVYKLY+VVGP QHSHRLCR+GARPALTTASLLRST+
Subjt:  VGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
KAA0040192.1 hypothetical protein E6C27_scaffold1164G00040 [Cucumis melo var. makuwa]6.4e-1493.02Show/hide
Query:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        GYTQYNNVYKLYDVVGP QHSHRLCR+GARPALTTASLLRST+
Subjt:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
KAA0040961.1 hypothetical protein E6C27_scaffold125G001610 [Cucumis melo var. makuwa]2.2e-1495.35Show/hide
Query:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        GYTQYNNVYKLYDVVGPVQHSHRLCR+GARPALTTASLLRST+
Subjt:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
KAA0062250.1 hypothetical protein E6C27_scaffold679G00140 [Cucumis melo var. makuwa]1.8e-1386.96Show/hide
Query:  RCVGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        RCVGYTQYNNVYK YDVV   QHSHRLCR+GARPALTTASLLRST+
Subjt:  RCVGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
TrEMBL top hitse value%identityAlignment
A0A5A7SPD9 Uncharacterized protein3.1e-1493.02Show/hide
Query:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        GYTQYNNVYKLYDVVGP QHSHRLCR+GARPALTTASLLRST+
Subjt:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
A0A5A7T9S0 Uncharacterized protein3.1e-1493.02Show/hide
Query:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        GYTQYNNVYKLYDVVGP QHSHRLCR+GARPALTTASLLRST+
Subjt:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
A0A5A7TDP0 Uncharacterized protein1.2e-1388.64Show/hide
Query:  VGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        +GYTQYNNVYKLY+VVGP QHSHRLCR+GARPALTTASLLRST+
Subjt:  VGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
A0A5A7TH18 Uncharacterized protein1.1e-1495.35Show/hide
Query:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        GYTQYNNVYKLYDVVGPVQHSHRLCR+GARPALTTASLLRST+
Subjt:  GYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
A0A5A7V4V1 Uncharacterized protein9.0e-1486.96Show/hide
Query:  RCVGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
        RCVGYTQYNNVYK YDVV   QHSHRLCR+GARPALTTASLLRST+
Subjt:  RCVGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATCTACGTTGTGTAGGGTACACCCAGTACAACAACGTTTACAAGCTCTACGATGTAGTGGGGCCCGTCCAGCACTCCCATCGTCTTTGTCGTAATGGGGCCCG
CCCAGCACTCACGACAGCATCGTTGTTACGGAGTACTGTAACGACCCAACTTTTCCGGACTAAGCTGAGGTTACTACCAAATACCAAAACTCGACCATTCAACATAAAAT
TTAAAACGGACCAGATACGATTCATTAAAACATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATCTACGTTGTGTAGGGTACACCCAGTACAACAACGTTTACAAGCTCTACGATGTAGTGGGGCCCGTCCAGCACTCCCATCGTCTTTGTCGTAATGGGGCCCG
CCCAGCACTCACGACAGCATCGTTGTTACGGAGTACTGTAACGACCCAACTTTTCCGGACTAAGCTGAGGTTACTACCAAATACCAAAACTCGACCATTCAACATAAAAT
TTAAAACGGACCAGATACGATTCATTAAAACATTATAA
Protein sequenceShow/hide protein sequence
MTNLRCVGYTQYNNVYKLYDVVGPVQHSHRLCRNGARPALTTASLLRSTVTTQLFRTKLRLLPNTKTRPFNIKFKTDQIRFIKTL