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MELO3C028064 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028064
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCCR4-NOT transcription complex subunit 1
Genome locationchr11:15307111..15314849
RNA-Seq ExpressionMELO3C028064
SyntenyMELO3C028064
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33848.1 hypothetical protein [Cucumis melo subsp. melo]4.2e-2358.04Show/hide
Query:  LGSRLGSARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLTRLARLSSLGSLGS---------ACSNRIRGSGRVFLPFFFAPPDNARVRDVDGGRG
        L SR   A  GSA       G  R +A   R +AR +  +A   RL RL+ LGS GS         A SNRIRGS  V     FAPPDNARVRDVDGGRG
Subjt:  LGSRLGSARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLTRLARLSSLGSLGS---------ACSNRIRGSGRVFLPFFFAPPDNARVRDVDGGRG

Query:  WLSSAFSAASGTPIEVEPSTVTETEEEEEISATGGWKRNGDGW
        WLSSAF AASGT  EV PSTVTETEEE E+SA GGWKR G+GW
Subjt:  WLSSAFSAASGTPIEVEPSTVTETEEEEEISATGGWKRNGDGW
KAA0025991.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]5.1e-0555.93Show/hide
Query:  LGSRLGSLGSRLGS----------------LGSRLGSL-----GSARLGLGSARLGSRLGS--ARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLT
        LGSRLGSLGSRLGS                L +RLGS      GSA    GSAR GSRLGS  +RLGS      RLGLVRLAARL   AARLTRLAARL 
Subjt:  LGSRLGSLGSRLGS----------------LGSRLGSL-----GSARLGLGSARLGSRLGS--ARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLT

Query:  RLARLSSLGSLGSACSNR
          AR S+  + GSA S R
Subjt:  RLARLSSLGSLGSACSNR
TrEMBL top hitse value%identityAlignment
A0A5A7SP62 CCR4-NOT transcription complex subunit 12.5e-0555.93Show/hide
Query:  LGSRLGSLGSRLGS----------------LGSRLGSL-----GSARLGLGSARLGSRLGS--ARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLT
        LGSRLGSLGSRLGS                L +RLGS      GSA    GSAR GSRLGS  +RLGS      RLGLVRLAARL   AARLTRLAARL 
Subjt:  LGSRLGSLGSRLGS----------------LGSRLGSL-----GSARLGLGSARLGSRLGS--ARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLT

Query:  RLARLSSLGSLGSACSNR
          AR S+  + GSA S R
Subjt:  RLARLSSLGSLGSACSNR
E5GBK6 Uncharacterized protein2.0e-2358.04Show/hide
Query:  LGSRLGSARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLTRLARLSSLGSLGS---------ACSNRIRGSGRVFLPFFFAPPDNARVRDVDGGRG
        L SR   A  GSA       G  R +A   R +AR +  +A   RL RL+ LGS GS         A SNRIRGS  V     FAPPDNARVRDVDGGRG
Subjt:  LGSRLGSARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLTRLARLSSLGSLGS---------ACSNRIRGSGRVFLPFFFAPPDNARVRDVDGGRG

Query:  WLSSAFSAASGTPIEVEPSTVTETEEEEEISATGGWKRNGDGW
        WLSSAF AASGT  EV PSTVTETEEE E+SA GGWKR G+GW
Subjt:  WLSSAFSAASGTPIEVEPSTVTETEEEEEISATGGWKRNGDGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCTCGGCCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGGCTCGGCTTGGACTCGGCTCGGCTCG
GCTTGGTTCTCGGCTTGGCTCGGCTCGGCTCGGCTCGGCTTGGTTCGGCTTGGTTCGGCTCGGCTTGGTTCGGCTCGCGGCTCGGCTCACTCGGGTCGCGGCTCGGCTCA
CTCGGCTCGCGGCTCGGCTCACTCGGCTCGCTCGGCTCAGCTCGCTCGGCTCGCTCGGCTCGGCTTGCTCGAATCGGATCCGTGGCTCGGGTCGGGTTTTTCTTCCCTTT
TTCTTTGCTCCGCCCGACAACGCTCGAGTGAGAGACGTCGACGGCGGACGTGGGTGGCTCTCCTCGGCGTTCAGTGCTGCGTCGGGAACACCGATTGAAGTGGAGCCGTC
GACGGTGACAGAAACGGAGGAAGAGGAAGAGATATCGGCTACCGGCGGATGGAAGCGAAACGGAGATGGATGGAGGCCGCGGCGAACGTCGGTGGCT
mRNA sequenceShow/hide mRNA sequence
GGCTCGGCCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGGCTCGGCTTGGACTCGGCTCGGCTCG
GCTTGGTTCTCGGCTTGGCTCGGCTCGGCTCGGCTCGGCTTGGTTCGGCTTGGTTCGGCTCGGCTTGGTTCGGCTCGCGGCTCGGCTCACTCGGGTCGCGGCTCGGCTCA
CTCGGCTCGCGGCTCGGCTCACTCGGCTCGCTCGGCTCAGCTCGCTCGGCTCGCTCGGCTCGGCTTGCTCGAATCGGATCCGTGGCTCGGGTCGGGTTTTTCTTCCCTTT
TTCTTTGCTCCGCCCGACAACGCTCGAGTGAGAGACGTCGACGGCGGACGTGGGTGGCTCTCCTCGGCGTTCAGTGCTGCGTCGGGAACACCGATTGAAGTGGAGCCGTC
GACGGTGACAGAAACGGAGGAAGAGGAAGAGATATCGGCTACCGGCGGATGGAAGCGAAACGGAGATGGATGGAGGCCGCGGCGAACGTCGGTGGCTG
Protein sequenceShow/hide protein sequence
GSASLGSRLGSLGSRLGSLGSRLGSLGSARLGLGSARLGSRLGSARLGSAWFGLVRLGLVRLAARLTRVAARLTRLAARLTRLARLSSLGSLGSACSNRIRGSGRVFLPF
FFAPPDNARVRDVDGGRGWLSSAFSAASGTPIEVEPSTVTETEEEEEISATGGWKRNGDGWRPRRTSVA