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MELO3C028097 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028097
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr03:22308923..22309357
RNA-Seq ExpressionMELO3C028097
SyntenyMELO3C028097
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036099.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-5997.46Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
        MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC

Query:  IVAEKELFDNWVRVWNII
        IVAEKELFDNWVRV NII
Subjt:  IVAEKELFDNWVRVWNII

KAA0036474.1 retrotransposon protein [Cucumis melo var. makuwa]3.0e-6299.15Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI
        MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFR GYLAQLVRMMAEKLRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI

Query:  VAEKELFDNWVRVWNII
        VAEKELFDNWVRVWNII
Subjt:  VAEKELFDNWVRVWNII

KAA0046637.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-6097.46Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
        MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC

Query:  IVAEKELFDNWVRVWNII
        IVA+KELFDNWVRVWNII
Subjt:  IVAEKELFDNWVRVWNII

KAA0053616.1 retrotransposon protein [Cucumis melo var. makuwa]5.6e-6198.31Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
        MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC

Query:  IVAEKELFDNWVRVWNII
        IVAEKELFDNWVRVWNII
Subjt:  IVAEKELFDNWVRVWNII

KAA0059075.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-5997.46Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
        MSTSNRAPRHV TREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC

Query:  IVAEKELFDNWVRVWNII
        IVAEKELFDNWVRVWNII
Subjt:  IVAEKELFDNWVRVWNII

TrEMBL top hitse value%identityAlignment
A0A5A7SYW1 Retrotransposon protein1.4e-6299.15Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI
        MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFR GYLAQLVRMMAEKLRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI

Query:  VAEKELFDNWVRVWNII
        VAEKELFDNWVRVWNII
Subjt:  VAEKELFDNWVRVWNII

A0A5A7T3X9 Retrotransposon protein1.1e-5997.46Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
        MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC

Query:  IVAEKELFDNWVRVWNII
        IVAEKELFDNWVRV NII
Subjt:  IVAEKELFDNWVRVWNII

A0A5A7TXH6 Retrotransposon protein7.9e-6197.46Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
        MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC

Query:  IVAEKELFDNWVRVWNII
        IVA+KELFDNWVRVWNII
Subjt:  IVAEKELFDNWVRVWNII

A0A5A7UHB1 Retrotransposon protein2.7e-6198.31Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
        MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC

Query:  IVAEKELFDNWVRVWNII
        IVAEKELFDNWVRVWNII
Subjt:  IVAEKELFDNWVRVWNII

A0A5A7UZR1 Retrotransposon protein8.7e-6097.46Show/hide
Query:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
        MSTSNRAPRHV TREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC
Subjt:  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKC

Query:  IVAEKELFDNWVRVWNII
        IVAEKELFDNWVRVWNII
Subjt:  IVAEKELFDNWVRVWNII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACCTCAAATCGTGCCCCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTGGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAA
TGGTACATTCCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTAAGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACATTGA
AGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCGTTGCGGAGAAGGAATTATTTGATAATTGG
GTTAGGGTATGGAATATAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTATTTTATTTTGGAGTTTAATGTATGTCAACCTCAAATCGTGCCCCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTGGAATGTTTAATGGAGCTAG
TGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTCCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTAAGATGTCAGGTACGAGCAACAACT
GTAATTGATTGTAGGATCAAGACATTGAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCGT
TGCGGAGAAGGAATTATTTGATAATTGGGTTAGGGTATGGAATATAATTTAAACG
Protein sequenceShow/hide protein sequence
MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW
VRVWNII