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MELO3C028149 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028149
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRibosomal protein s12
Genome locationchr02:23080682..23080971
RNA-Seq ExpressionMELO3C028149
SyntenyMELO3C028149
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009536 - plastid (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM97518.1 hypothetical protein AMTR_s05231p00006790, partial [Amborella trichopoda]6.4e-2398.33Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATS
        ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTS TS
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATS

KAF4359988.1 hypothetical protein F8388_004495 [Cannabis sativa]4.9e-2396.72Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSR
        ALHIRLEFAPRNIAIPTPSRQSH+PLIHSHSITAGEQVKIEKLTLGLGIIRLELMTS TSR
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSR

KAF4360038.1 hypothetical protein G4B88_025799, partial [Cannabis sativa]1.1e-1996.36Show/hide
Query:  FAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSRR
        FAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTS TSR+
Subjt:  FAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSRR

KAG9438526.1 hypothetical protein H6P81_021526 [Aristolochia fimbriata]3.5e-2181.08Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSRRHSTAELYPFPCP
        ALHI LEFAP NIAIPT SRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTS TSR  S    +  P P
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSRRHSTAELYPFPCP

TYJ97094.1 hypothetical protein E5676_scaffold23G00250 [Cucumis melo var. makuwa]8.1e-1884.75Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSAT
        A H+RL+FAPR+IAIPTPSRQSHEPLIHSHSI   EQVKIEKLTLGL IIRLELM SAT
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSAT

TrEMBL top hitse value%identityAlignment
A0A6N2K9N9 Uncharacterized protein5.3e-2391.04Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA-GEQVKIEKLTLGLGIIRLELMTSATSRRHSTA
        ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA GEQVKIEKLTLGLGIIRLELMTS TSR+  T+
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA-GEQVKIEKLTLGLGIIRLELMTSATSRRHSTA

A0A6N2KRR2 Uncharacterized protein5.3e-2391.04Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA-GEQVKIEKLTLGLGIIRLELMTSATSRRHSTA
        ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA GEQVKIEKLTLGLGIIRLELMTS TSR+  T+
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA-GEQVKIEKLTLGLGIIRLELMTSATSRRHSTA

A0A6N2M1J4 Uncharacterized protein5.3e-2391.04Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA-GEQVKIEKLTLGLGIIRLELMTSATSRRHSTA
        ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA GEQVKIEKLTLGLGIIRLELMTS TSR+  T+
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITA-GEQVKIEKLTLGLGIIRLELMTSATSRRHSTA

A0A7J6ENJ8 Uncharacterized protein2.4e-2396.72Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSR
        ALHIRLEFAPRNIAIPTPSRQSH+PLIHSHSITAGEQVKIEKLTLGLGIIRLELMTS TSR
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSR

U5CXB4 Uncharacterized protein (Fragment)3.1e-2398.33Show/hide
Query:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATS
        ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTS TS
Subjt:  ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGCTTCATATTCGCCTGGAGTTCGCTCCCAGAAATATAGCCATCCCCACCCCCTCACGTCAATCCCACGAGCCTCTTATCCATTCTCATTCGATCACGGCGGGGGAGCA
AGTCAAAATAGAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCGAACTGATGACTTCCGCCACGTCAAGGCGACACTCTACCGCTGAGTTATATCCCTTCCCTTGCC
CCCATCGAGAAATAGAACTGACTAATCCTAAGGCAAAGGGTCGAGAAACTCAACGCCACTATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTCATATTCGCCTGGAGTTCGCTCCCAGAAATATAGCCATCCCCACCCCCTCACGTCAATCCCACGAGCCTCTTATCCATTCTCATTCGATCACGGCGGGGGAG
CAAGTCAAAATAGAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCGAACTGATGACTTCCGCCACGTCAAGGCGACACTCTACCGCTGAGTTATATCCCTTCCCTTG
CCCCCATCGAGAAATAGAACTGACTAATCCTAAGGCAAAGGGTCGAGAAACTCAACGCCACTATTCTTGA
Protein sequenceShow/hide protein sequence
ALHIRLEFAPRNIAIPTPSRQSHEPLIHSHSITAGEQVKIEKLTLGLGIIRLELMTSATSRRHSTAELYPFPCPHREIELTNPKAKGRETQRHYS