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MELO3C028202 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028202
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retroelement transposase
Genome locationchr03:17132894..17133195
RNA-Seq ExpressionMELO3C028202
SyntenyMELO3C028202
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025243.1 hypothetical protein E6C27_scaffold541G00920 [Cucumis melo var. makuwa]1.1e-1165.56Show/hide
Query:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT
        +ACGSAC+R   R    C R     LHK A R  TRG   RT AR    GFRK+ARVGSGRGAG RSDPCARG GFRISGGAAA GGPAT
Subjt:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT

KAA0036594.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa]1.1e-1165.56Show/hide
Query:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT
        +ACGSAC+R   R    C R     LHK A R  TRG   RT AR    GFRK+ARVGSGRGAG RSDPCARG GFRISGGAAA GGPAT
Subjt:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT

KAA0041436.1 hypothetical protein E6C27_scaffold6G00090 [Cucumis melo var. makuwa]1.1e-1165.56Show/hide
Query:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT
        +ACGSAC+R   R    C R     LHK A R  TRG   RT AR    GFRK+ARVGSGRGAG RSDPCARG GFRISGGAAA GGPAT
Subjt:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT

KAA0056637.1 hypothetical protein E6C27_scaffold288G001580 [Cucumis melo var. makuwa]1.0e-2098.33Show/hide
Query:  KRAARLTRGRTRARVGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPATHGFV
        KRAARLTRGRTRARVGF+KMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPATHGFV
Subjt:  KRAARLTRGRTRARVGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPATHGFV

TYK07424.1 hypothetical protein E5676_scaffold202G001510 [Cucumis melo var. makuwa]1.1e-1165.56Show/hide
Query:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT
        +ACGSAC+R   R    C R     LHK A R  TRG   RT AR    GFRK+ARVGSGRGAG RSDPCARG GFRISGGAAA GGPAT
Subjt:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT

TrEMBL top hitse value%identityAlignment
A0A5A7T805 Uncharacterized protein5.4e-1265.56Show/hide
Query:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT
        +ACGSAC+R   R    C R     LHK A R  TRG   RT AR    GFRK+ARVGSGRGAG RSDPCARG GFRISGGAAA GGPAT
Subjt:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT

A0A5A7TGU2 Uncharacterized protein5.4e-1265.56Show/hide
Query:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT
        +ACGSAC+R   R    C R     LHK A R  TRG   RT AR    GFRK+ARVGSGRGAG RSDPCARG GFRISGGAAA GGPAT
Subjt:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT

A0A5A7UPT5 Uncharacterized protein4.9e-2198.33Show/hide
Query:  KRAARLTRGRTRARVGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPATHGFV
        KRAARLTRGRTRARVGF+KMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPATHGFV
Subjt:  KRAARLTRGRTRARVGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPATHGFV

A0A5D3CXQ7 Uncharacterized protein5.4e-1265.56Show/hide
Query:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT
        +ACGSAC+R   R    C R     LHK A R  TRG   RT AR    GFRK+ARVGSGRGAG RSDPCARG GFRISGGAAA GGPAT
Subjt:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT

A0A5D3DM11 Uncharacterized protein5.4e-1265.56Show/hide
Query:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT
        +ACGSAC+R   R    C R     LHK A R  TRG   RT AR    GFRK+ARVGSGRGAG RSDPCARG GFRISGGAAA GGPAT
Subjt:  YACGSACDRRETRLRLWCRR---RGLHKRAAR-LTRG---RTRAR---VGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTCGACTCGGCTTGGTACAGGAACTTTACGCGTGCGGCTCGGCTTGCGACAGAAGGGAGACGCGGCTCAGGTTGTGGTGCAGGCGGCGCGGCTTGCACAAGCGCGCGGC
GCGGCTCACACGAGGACGCACGCGGGCGCGGGTCGGGTTCCGGAAGATGGCGCGCGTCGGTTCGGGTCGCGGGGCGGGTTTTCGGTCGGATCCTTGTGCGCGAGGCGCTG
GCTTCCGGATTTCGGGTGGCGCGGCGGCTGCTGGTGGTCCGGCTACCCACGGCTTCGTT
mRNA sequenceShow/hide mRNA sequence
GCTCGACTCGGCTTGGTACAGGAACTTTACGCGTGCGGCTCGGCTTGCGACAGAAGGGAGACGCGGCTCAGGTTGTGGTGCAGGCGGCGCGGCTTGCACAAGCGCGCGGC
GCGGCTCACACGAGGACGCACGCGGGCGCGGGTCGGGTTCCGGAAGATGGCGCGCGTCGGTTCGGGTCGCGGGGCGGGTTTTCGGTCGGATCCTTGTGCGCGAGGCGCTG
GCTTCCGGATTTCGGGTGGCGCGGCGGCTGCTGGTGGTCCGGCTACCCACGGCTTCGTT
Protein sequenceShow/hide protein sequence
ARLGLVQELYACGSACDRRETRLRLWCRRRGLHKRAARLTRGRTRARVGFRKMARVGSGRGAGFRSDPCARGAGFRISGGAAAAGGPATHGFV