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MELO3C028238 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028238
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPol protein
Genome locationchr01:15724323..15731398
RNA-Seq ExpressionMELO3C028238
SyntenyMELO3C028238
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045842.1 pol protein [Cucumis melo var. makuwa]3.5e-2088.89Show/hide
Query:  QRAAVWLGLGCDAACDLAAARRGRWEISWRSRAADGASQTAWRSAGQTRAWRAAARLDLFSDA
        QRAAVWLG GCDAACDLAAARRGRW+I WRS AAD ASQTAWRSAGQTRA R AARLDLFSDA
Subjt:  QRAAVWLGLGCDAACDLAAARRGRWEISWRSRAADGASQTAWRSAGQTRAWRAAARLDLFSDA
KAA0067495.1 hypothetical protein E6C27_scaffold40G001910 [Cucumis melo var. makuwa]6.3e-3868.21Show/hide
Query:  AGAARLGSVQKLCACGSACDRRETRLSLRCRRCGLHAGATRLRRSTRRGSQRGRGSVTRMHAARLARGRGSGSGRWRGSSDGLRGSDDQRAAVWLGLGCD
        A AARL + ++   CGSAC                  GA   R        RGRGSVTRMHAARLA GRGSGSGRWRGSSDGLR S  QRAAVWLG GCD
Subjt:  AGAARLGSVQKLCACGSACDRRETRLSLRCRRCGLHAGATRLRRSTRRGSQRGRGSVTRMHAARLARGRGSGSGRWRGSSDGLRGSDDQRAAVWLGLGCD

Query:  AACDLAAARRGRWEISWRSRAADGASQTAWRSAGQTRAWRAAARLDLFSDA
        AACDLAAARRGRW+I WRSRAAD ASQTAWRSAGQTRA RA ARLDLFSDA
Subjt:  AACDLAAARRGRWEISWRSRAADGASQTAWRSAGQTRAWRAAARLDLFSDA
TrEMBL top hitse value%identityAlignment
A0A5A7TR26 Pol protein1.7e-2088.89Show/hide
Query:  QRAAVWLGLGCDAACDLAAARRGRWEISWRSRAADGASQTAWRSAGQTRAWRAAARLDLFSDA
        QRAAVWLG GCDAACDLAAARRGRW+I WRS AAD ASQTAWRSAGQTRA R AARLDLFSDA
Subjt:  QRAAVWLGLGCDAACDLAAARRGRWEISWRSRAADGASQTAWRSAGQTRAWRAAARLDLFSDA
A0A5A7VPA6 Uncharacterized protein3.0e-3868.21Show/hide
Query:  AGAARLGSVQKLCACGSACDRRETRLSLRCRRCGLHAGATRLRRSTRRGSQRGRGSVTRMHAARLARGRGSGSGRWRGSSDGLRGSDDQRAAVWLGLGCD
        A AARL + ++   CGSAC                  GA   R        RGRGSVTRMHAARLA GRGSGSGRWRGSSDGLR S  QRAAVWLG GCD
Subjt:  AGAARLGSVQKLCACGSACDRRETRLSLRCRRCGLHAGATRLRRSTRRGSQRGRGSVTRMHAARLARGRGSGSGRWRGSSDGLRGSDDQRAAVWLGLGCD

Query:  AACDLAAARRGRWEISWRSRAADGASQTAWRSAGQTRAWRAAARLDLFSDA
        AACDLAAARRGRW+I WRSRAAD ASQTAWRSAGQTRA RA ARLDLFSDA
Subjt:  AACDLAAARRGRWEISWRSRAADGASQTAWRSAGQTRAWRAAARLDLFSDA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTAGTAGTAGAATCTCTTACCTGGAGATTTGGTTGTCGAGTCCTAAAAGTAAGAGAAGGTGTGTTTTCCAAGCAGCAGGGCCCTAAATGGTTAAAAACAACAAT
TAAACCTAACCTTCAAGGAACAGAGATCCACGAGTCGTTTGAAGCAACTTACCCCAAAATCAAGGTTGCGCTAACTCCCTTTAAGCCGAGGGAGAATCCCACGCTGCAGC
AGAGCCAAATTAGTCTTGGCGGCTCGGCTGGAAAAGGACAGGGACCGGCTCGGCTTGGCGCAGGCGCGGCTCGACTCGGCTCGGTACAGAAACTTTGCGCGTGCGGCTCG
GCTTGCGACAGGAGGGAGACGCGGCTCAGCTTGCGGTGCAGGCGGTGCGGCTTGCACGCGGGCGCGACTCGGTTACGCAGAAGCACGCGGCGCGGCTCACAACGCGGACG
CGGCTCGGTTACGCGGATGCACGCGGCGCGGCTTGCACGCGGACGCGGGTCGGGTTCCGGAAGATGGCGCGGGTCGAGCGACGGGCTTCGCGGCTCCGACGACCAGCGCG
CGGCGGTGTGGCTCGGATTGGGGTGCGACGCGGCTTGCGACTTGGCTGCGGCGCGACGCGGACGATGGGAGATCAGCTGGCGAAGTCGGGCAGCTGACGGCGCGAGTCAG
ACGGCTTGGAGGTCGGCGGGACAGACGCGAGCGTGGCGTGCGGCGGCTCGGCTTGATCTGTTCTCCGACGCGCGAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTAGTAGTAGAATCTCTTACCTGGAGATTTGGTTGTCGAGTCCTAAAAGTAAGAGAAGGTGTGTTTTCCAAGCAGCAGGGCCCTAAATGGTTAAAAACAACAAT
TAAACCTAACCTTCAAGGAACAGAGATCCACGAGTCGTTTGAAGCAACTTACCCCAAAATCAAGGTTGCGCTAACTCCCTTTAAGCCGAGGGAGAATCCCACGCTGCAGC
AGAGCCAAATTAGTCTTGGCGGCTCGGCTGGAAAAGGACAGGGACCGGCTCGGCTTGGCGCAGGCGCGGCTCGACTCGGCTCGGTACAGAAACTTTGCGCGTGCGGCTCG
GCTTGCGACAGGAGGGAGACGCGGCTCAGCTTGCGGTGCAGGCGGTGCGGCTTGCACGCGGGCGCGACTCGGTTACGCAGAAGCACGCGGCGCGGCTCACAACGCGGACG
CGGCTCGGTTACGCGGATGCACGCGGCGCGGCTTGCACGCGGACGCGGGTCGGGTTCCGGAAGATGGCGCGGGTCGAGCGACGGGCTTCGCGGCTCCGACGACCAGCGCG
CGGCGGTGTGGCTCGGATTGGGGTGCGACGCGGCTTGCGACTTGGCTGCGGCGCGACGCGGACGATGGGAGATCAGCTGGCGAAGTCGGGCAGCTGACGGCGCGAGTCAG
ACGGCTTGGAGGTCGGCGGGACAGACGCGAGCGTGGCGTGCGGCGGCTCGGCTTGATCTGTTCTCCGACGCGCGAAGGTGACGCTGACTCGGCTTCGGGCGACGGTTGCG
AGAGACGGCTGCAGACACGACGCGGCGTGCGGCGGCTTGACTCGGTTGAATTCTCCGGCGCGGCTGGGAGGGTGGCGTCGGCTCGGTGGCGGCGGCTATGGTGGGAGCAA
AGTGGGGCTAGGGTTTTTTTTTTCTTGGGAAGCAAGCGAAACACGATCTACAACGCTATCGATCAACTCCAAAATGGAGACCTGTAAAGTGCCCTCGTCAATTGGATTCT
GTAGGGTGCGGGTACTACGTGCAAAAGTACATACATGAGATAGTGCATAATTCTAGTACTTCTATTACTAACCTTTTCAATACCAAAAATGCATATAGGCAAGAGGAGAT
TGATGAGATTCGAACTGAATGGGCAACTTTTGTTAGC
Protein sequenceShow/hide protein sequence
MELVVESLTWRFGCRVLKVREGVFSKQQGPKWLKTTIKPNLQGTEIHESFEATYPKIKVALTPFKPRENPTLQQSQISLGGSAGKGQGPARLGAGAARLGSVQKLCACGS
ACDRRETRLSLRCRRCGLHAGATRLRRSTRRGSQRGRGSVTRMHAARLARGRGSGSGRWRGSSDGLRGSDDQRAAVWLGLGCDAACDLAAARRGRWEISWRSRAADGASQ
TAWRSAGQTRAWRAAARLDLFSDARR