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MELO3C028283 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028283
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Genome locationchr02:19081828..19081987
RNA-Seq ExpressionMELO3C028283
SyntenyMELO3C028283
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003972 - RNA ligase (ATP) activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059489.1 ribosomal protein L5 [Cucumis melo var. makuwa]1.0e-1475.47Show/hide
Query:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        LSIFGAR   TS HTPG+L  TFS+GIGRE SSLEG+LWC+PK SK+WPMLPT
Subjt:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]6.5e-1781.13Show/hide
Query:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        LSIF ARTPRTSTHT G+LPD FS+GIG+EASSLEGELWC+PK+SK+W MLPT
Subjt:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]3.8e-1781.13Show/hide
Query:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        LSIFGA  PRTSTHTPG+LPD FS GI REA SLEGELWCDPK+S++WPMLPT
Subjt:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]2.3e-1486.96Show/hide
Query:  TPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        TPRTSTHT G+LPDTFS GIGREASSLEGEL CDPK SK+WPMLPT
Subjt:  TPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

TYK23424.1 gag/pol protein [Cucumis melo var. makuwa]8.8e-1477.36Show/hide
Query:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        L IFGA TPRTSTHT  +LPD FS+GIGREASSLEGEL CDPK  K+WPML T
Subjt:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

TrEMBL top hitse value%identityAlignment
A0A5A7V129 Ribosomal protein L5 (Mitochondrion)5.0e-1575.47Show/hide
Query:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        LSIFGAR   TS HTPG+L  TFS+GIGRE SSLEG+LWC+PK SK+WPMLPT
Subjt:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein3.2e-1781.13Show/hide
Query:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        LSIF ARTPRTSTHT G+LPD FS+GIG+EASSLEGELWC+PK+SK+W MLPT
Subjt:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

A0A5D3CZ27 ULP_PROTEASE domain-containing protein1.9e-1781.13Show/hide
Query:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        LSIFGA  PRTSTHTPG+LPD FS GI REA SLEGELWCDPK+S++WPMLPT
Subjt:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

A0A5D3DFP2 Uncharacterized protein1.1e-1486.96Show/hide
Query:  TPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        TPRTSTHT G+LPDTFS GIGREASSLEGEL CDPK SK+WPMLPT
Subjt:  TPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

A0A5D3DIF8 Gag/pol protein4.3e-1477.36Show/hide
Query:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT
        L IFGA TPRTSTHT  +LPD FS+GIGREASSLEGEL CDPK  K+WPML T
Subjt:  LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATACTCCCTGACACGTTTTCCAAAGGTATAGGTCGGGAAGCGAGCTCGTTGGAG
GGAGAACTGTGGTGCGATCCAAAACAGTCCAAAAAATGGCCAATGCTTCCAACG
mRNA sequenceShow/hide mRNA sequence
TCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATACTCCCTGACACGTTTTCCAAAGGTATAGGTCGGGAAGCGAGCTCGTTGGA
GGGAGAACTGTGGTGCGATCCAAAACAGTCCAAAAAATGGCCAATGCTTCCAACG
Protein sequenceShow/hide protein sequence
LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT