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MELO3C028307 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028307
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Genome locationchr09:12181960..12182989
RNA-Seq ExpressionMELO3C028307
SyntenyMELO3C028307
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026022.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]5.5e-3484.71Show/hide
Query:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK
        MLPD FS GIGREA+SLEGELWCD KRSKRWPMLPTSGE SSG RNHWKCTCSEGNGLSSRT G RPK+ RA M RTQFSRPG K
Subjt:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK

KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.5e-2675.61Show/hide
Query:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRP
        MLPDTFSQGIG++ASSLEGE  CD K+SK WPMLPT  + SSGV+NHWKCTC E N LSSRT  VRPK+ RARM RTQFSRP
Subjt:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRP

KAA0061317.1 hypothetical protein E6C27_scaffold6213G00130 [Cucumis melo var. makuwa]2.9e-2776.47Show/hide
Query:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK
        MLP  F+QGIGREASSLEGELW D KR KRWPML TSGE  SGVRNHWKCTCS  N LSSRT GV P + R RMSRTQFSRP  K
Subjt:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.3e-2774.7Show/hide
Query:  PDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK
        PD F   + REASSLE ELWCD KRSKRWPM PT+GE SSGVRNHWKCTCSEGNGL+SRT G  PK+ RARM R+QFSR G K
Subjt:  PDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK

KAA0066117.1 mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa]1.6e-3386.75Show/hide
Query:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPG
        MLPDTFS GIGREASSLEGELWCD KRSKRWP LPTSGE SSGVRNHWKCTCSEGNGLSSRT G RPK+  A M RTQFSRPG
Subjt:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPG

TrEMBL top hitse value%identityAlignment
A0A5A7SLK2 Retrovirus-related Pol polyprotein from transposon 17.62.7e-3484.71Show/hide
Query:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK
        MLPD FS GIGREA+SLEGELWCD KRSKRWPMLPTSGE SSG RNHWKCTCSEGNGLSSRT G RPK+ RA M RTQFSRPG K
Subjt:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK

A0A5A7V368 Uncharacterized protein1.4e-2776.47Show/hide
Query:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK
        MLP  F+QGIGREASSLEGELW D KR KRWPML TSGE  SGVRNHWKCTCS  N LSSRT GV P + R RMSRTQFSRP  K
Subjt:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein6.4e-2874.7Show/hide
Query:  PDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK
        PD F   + REASSLE ELWCD KRSKRWPM PT+GE SSGVRNHWKCTCSEGNGL+SRT G  PK+ RARM R+QFSR G K
Subjt:  PDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK

A0A5A7VGB1 Mitochondrial intermembrane space import and assembly protein 407.8e-3486.75Show/hide
Query:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPG
        MLPDTFS GIGREASSLEGELWCD KRSKRWP LPTSGE SSGVRNHWKCTCSEGNGLSSRT G RPK+  A M RTQFSRPG
Subjt:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPG

A0A5D3E5W4 NBS-LRR type resistance protein1.2e-2675.61Show/hide
Query:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRP
        MLPDTFSQGIG++ASSLEGE  CD K+SK WPMLPT  + SSGV+NHWKCTC E N LSSRT  VRPK+ RARM RTQFSRP
Subjt:  MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCCTGACACATTTTCCCAAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACTCAAAACGGTCCAAAAGATGGCCAATGCTTCCAACGAG
TGGTGAACACTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTTCGGTGTTCGTCCCAAACAAATGCGAGCGAGAA
TGTCCCGGACTCAGTTTTCCCGTCCTGGGACAAAA
mRNA sequenceShow/hide mRNA sequence
CCTATTGGTCATAAGTCTTTCGATCTTTGAGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACATTTTCCCAAGGTATAGGTCGGGAAGCGA
GCTCGTTGGAGGGAGAACTGTGGTGCGACTCAAAACGGTCCAAAAGATGGCCAATGCTTCCAACGAGTGGTGAACACTCGTCCGGTGTCAGAAACCACTGGAAATGCACT
TGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTTCGGTGTTCGTCCCAAACAAATGCGAGCGAGAATGTCCCGGACTCAGTTTTCCCGTCCTGGGACAAAA
Protein sequenceShow/hide protein sequence
MLPDTFSQGIGREASSLEGELWCDSKRSKRWPMLPTSGEHSSGVRNHWKCTCSEGNGLSSRTFGVRPKQMRARMSRTQFSRPGTK