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MELO3C028331 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028331
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retroelement transposase
Genome locationchr01:3692936..3693105
RNA-Seq ExpressionMELO3C028331
SyntenyMELO3C028331
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025243.1 hypothetical protein E6C27_scaffold541G00920 [Cucumis melo var. makuwa]1.1e-0975Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SD CARG GFRISGGAAA GGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
KAA0036594.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa]1.1e-0975Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SD CARG GFRISGGAAA GGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
KAA0041436.1 hypothetical protein E6C27_scaffold6G00090 [Cucumis melo var. makuwa]1.1e-0975Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SD CARG GFRISGGAAA GGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
KAA0058956.1 hypothetical protein E6C27_scaffold98G001400 [Cucumis melo var. makuwa]5.7e-1178.85Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SDLCARG GFRISGGAAAAGGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
TYK07424.1 hypothetical protein E5676_scaffold202G001510 [Cucumis melo var. makuwa]1.1e-0975Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SD CARG GFRISGGAAA GGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
TrEMBL top hitse value%identityAlignment
A0A5A7T805 Uncharacterized protein5.2e-1075Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SD CARG GFRISGGAAA GGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
A0A5A7TGU2 Uncharacterized protein5.2e-1075Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SD CARG GFRISGGAAA GGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
A0A5A7UXP4 Uncharacterized protein2.7e-1178.85Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SDLCARG GFRISGGAAAAGGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
A0A5D3CXQ7 Uncharacterized protein5.2e-1075Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SD CARG GFRISGGAAA GGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
A0A5D3DM11 Uncharacterized protein5.2e-1075Show/hide
Query:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
        +A VGS RGAG +SD CARG GFRISGGAAA GGPA  ASLGDG + AFRLR
Subjt:  MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCACGTCGGTTCGGCTCGCGGAGCGGGTTTTCAGTCGGATCTTTGCGCGCGAGGCGCTGGCTTCCGGATTTCGGGTGGCGCGGCGGCTGCTGGTGGTCCGGCTAT
CACGGCTTCGCTCGGCGACGGCTGCAAACGAGCGTTTCGGCTGCGCTGCGTCGGATTG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCACGTCGGTTCGGCTCGCGGAGCGGGTTTTCAGTCGGATCTTTGCGCGCGAGGCGCTGGCTTCCGGATTTCGGGTGGCGCGGCGGCTGCTGGTGGTCCGGCTAT
CACGGCTTCGCTCGGCGACGGCTGCAAACGAGCGTTTCGGCTGCGCTGCGTCGGATTGAA
Protein sequenceShow/hide protein sequence
MAHVGSARGAGFQSDLCARGAGFRISGGAAAAGGPAITASLGDGCKRAFRLRCVGL