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MELO3C028343 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028343
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon gag protein
Genome locationchr05:22410922..22411098
RNA-Seq ExpressionMELO3C028343
SyntenyMELO3C028343
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051981.1 hypothetical protein E6C27_scaffold60G004640 [Cucumis melo var. makuwa]4.1e-18100Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
KAA0064215.1 hypothetical protein E6C27_scaffold548G001630 [Cucumis melo var. makuwa]1.2e-1795.83Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVV+SY+LQPRMSSSQICCRRE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
KAA0065301.1 hypothetical protein E6C27_scaffold1023G00170 [Cucumis melo var. makuwa]3.5e-1797.92Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICC RE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
TYK04576.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.1e-18100Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
TYK18585.1 hypothetical protein E5676_scaffold119G001120 [Cucumis melo var. makuwa]1.2e-1795.83Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVV+SY+LQPRMSSSQICCRRE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
TrEMBL top hitse value%identityAlignment
A0A5A7T770 Zinc finger Y-chromosomal protein 1-like isoform X11.7e-1797.92Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICC RE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
A0A5A7UEK9 Uncharacterized protein2.0e-18100Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
A0A5A7VE92 Uncharacterized protein5.8e-1895.83Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVV+SY+LQPRMSSSQICCRRE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
A0A5D3C2C8 Retrotransposon gag protein2.0e-18100Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
A0A5D3D4V9 Uncharacterized protein5.8e-1895.83Show/hide
Query:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
        MLQPRRSSSQICCSQKDFCLKYIVAEKVV+SY+LQPRMSSSQICCRRE
Subjt:  MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACAACCGAGAAGATCGTCGTCTCAAATATGTTGCAGCCAAAAAGATTTTTGTCTCAAGTATATTGTAGCCGAGAAAGTCGTCGTCTCATATATATTGCAGCCGAG
GATGTCGTCGTCTCAAATATGTTGCCGTCGAGAA
mRNA sequenceShow/hide mRNA sequence
TATGTTACAACCGAGAAGATCGTCGTCTCAAATATGTTGCAGCCAAAAAGATTTTTGTCTCAAGTATATTGTAGCCGAGAAAGTCGTCGTCTCATATATATTGCAGCCGA
GGATGTCGTCGTCTCAAATATGTTGCCGTCGAGAAG
Protein sequenceShow/hide protein sequence
MLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQPRMSSSQICCRRE