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MELO3C028352 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028352
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionATP-dependent Clp protease ATP-binding subunit ClpC
Genome locationchr05:23745694..23745863
RNA-Seq ExpressionMELO3C028352
SyntenyMELO3C028352
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0034605 - cellular response to heat (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR018368 - ClpA/B, conserved site 1
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5807089.1 putative ClpA/B family, UVR domain, AAA+ ATPase domain, Clp ATPase [Helianthus annuus]9.4e-1678.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

KAF5932772.1 hypothetical protein HYC85_028943 [Camellia sinensis]9.4e-1678.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

TYK21918.1 Chaperone protein ClpC1 chloroplastic [Cucumis melo var. makuwa]5.0e-1792.45Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDGAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEER KKL+EEIKQSDGAGAA+GAIDAANILKP LARGQL
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDGAGAAEGAIDAANILKPALARGQL

VAI29239.1 unnamed protein product [Triticum turgidum subsp. durum]9.4e-1678.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

XP_009337515.1 PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like [Pyrus x bretschneideri]9.4e-1678.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

TrEMBL top hitse value%identityAlignment
A0A1B6PCG3 Uncharacterized protein4.6e-1678.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

A0A1S3VVE4 chaperone protein ClpC, chloroplastic4.6e-1678.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

A0A5D3DEP3 Chaperone protein ClpC1 chloroplastic2.4e-1792.45Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDGAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEER KKL+EEIKQSDGAGAA+GAIDAANILKP LARGQL
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDGAGAAEGAIDAANILKPALARGQL

K3Z3M1 Uncharacterized protein4.6e-1678.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

M5WCY0 Uncharacterized protein4.6e-1678.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

SwissProt top hitse value%identityAlignment
P31541 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic1.2e-1878.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

P31542 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic1.2e-1878.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

P35100 Chaperone protein ClpC, chloroplastic1.2e-1878.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

Q2QVG9 Chaperone protein ClpC2, chloroplastic1.2e-1878.79Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

Q9FI56 Chaperone protein ClpC1, chloroplastic2.8e-1877.27Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEI+QSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

Arabidopsis top hitse value%identityAlignment
AT1G74310.1 heat shock protein 1014.0e-1252.24Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD--------------GAGAAEGAIDAANILKPALARGQL
        MG LVAG KYRGEFEERLK +++E++ ++              GAG  EG++DAAN+ KP LARGQL
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD--------------GAGAAEGAIDAANILKPALARGQL

AT3G48870.1 Clp ATPase2.0e-1977.27Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEI+QSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

AT3G48870.2 Clp ATPase2.0e-1977.27Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEI+QSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL

AT5G15450.1 casein lytic proteinase B33.3e-1149.25Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD--------------GAGAAEGAIDAANILKPALARGQL
        MG L+AG KYRGEFE+RLK +++E+  S+              GAGA  GA+DA N+LKP L RG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD--------------GAGAAEGAIDAANILKPALARGQL

AT5G50920.1 CLPC homologue 12.0e-1977.27Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL
        MGLLVAGTKYRGEFEERLKKLMEEI+QSD             GAGAAEGAIDAANILKPALARG+L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD-------------GAGAAEGAIDAANILKPALARGQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTCTTGTAGCTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAACAAAGTGATGGAGCAGGGGCTGCAGAAGGAGC
TATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTCAACTG
mRNA sequenceShow/hide mRNA sequence
ACCTTGGATATGGGCCTTCTTGTAGCTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAACAAAGTGATGGAGCAGGGGCTGC
AGAAGGAGCTATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTCAACTGCA
Protein sequenceShow/hide protein sequence
MGLLVAGTKYRGEFEERLKKLMEEIKQSDGAGAAEGAIDAANILKPALARGQL