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MELO3C028373 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028373
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionNon-LTR retroelement reverse transcriptase-like protein
Genome locationchr05:21227217..21227341
RNA-Seq ExpressionMELO3C028373
SyntenyMELO3C028373
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]1.1e-0479.41Show/hide
Query:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
        M LQ+RK+AELEDF+CSS ENASENA DSV+SSW
Subjt:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]9.7e-0682.35Show/hide
Query:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
        M+LQRRKQ EL+DF CSSQENAS+NAPDS FSSW
Subjt:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]3.0e-0788.24Show/hide
Query:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
        MHLQRRK+ ELEDFRCSSQEN SENAPDS FSSW
Subjt:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein4.7e-0682.35Show/hide
Query:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
        M+LQRRKQ EL+DF CSSQENAS+NAPDS FSSW
Subjt:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein9.8e-0475Show/hide
Query:  LQRRKQAELEDFRCSSQENASENAPDSVFSSW
        ++RR +A+L+DFRCSSQENASEN  DSVFSSW
Subjt:  LQRRKQAELEDFRCSSQENASENAPDSVFSSW
A0A5D3CGX3 Uncharacterized protein5.2e-0579.41Show/hide
Query:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
        M LQ+RK+AELEDF+CSS ENASENA DSV+SSW
Subjt:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
A0A5D3DFP2 Uncharacterized protein1.5e-0788.24Show/hide
Query:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
        MHLQRRK+ ELEDFRCSSQEN SENAPDS FSSW
Subjt:  MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTGCAGCGAAGGAAACAAGCTGAGCTCGAGGACTTCCGGTGTTCGTCCCAAGAAAACGCGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGG
mRNA sequenceShow/hide mRNA sequence
TCCGGTGTTAGAAATCACTTGAAATGCACTTGCAGCGAAGGAAACAAGCTGAGCTCGAGGACTTCCGGTGTTCGTCCCAAGAAAACGCGAGCGAGAATGCCCCGGACTCA
GTTTTCTCGTCCTGG
Protein sequenceShow/hide protein sequence
MHLQRRKQAELEDFRCSSQENASENAPDSVFSSW