; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C028400 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028400
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon gag protein
Genome locationchr01:23268696..23268823
RNA-Seq ExpressionMELO3C028400
SyntenyMELO3C028400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051981.1 hypothetical protein E6C27_scaffold60G004640 [Cucumis melo var. makuwa]2.2e-0580Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKY+AAKKIV+LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
KAA0056374.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-0580Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKYVAAKKI++LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
KAA0064215.1 hypothetical protein E6C27_scaffold548G001630 [Cucumis melo var. makuwa]1.7e-0582.86Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKYVAAKKIV+LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
TYK04576.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-0580Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKY+AAKKIV+LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
TYK18585.1 hypothetical protein E5676_scaffold119G001120 [Cucumis melo var. makuwa]1.7e-0582.86Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKYVAAKKIV+LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
TrEMBL top hitse value%identityAlignment
A0A5A7UEK9 Uncharacterized protein1.1e-0580Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKY+AAKKIV+LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
A0A5A7VE92 Uncharacterized protein8.2e-0682.86Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKYVAAKKIV+LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
A0A5D3C2C8 Retrotransposon gag protein1.1e-0580Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKY+AAKKIV+LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
A0A5D3D4V9 Uncharacterized protein8.2e-0682.86Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKYVAAKKIV+LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
A0A5D3DZF3 Retrotransposon gag protein1.1e-0580Show/hide
Query:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
        +CC RE R LKYVAAKKI++LKYVAAEKI+VSNML
Subjt:  MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTGCAACCGAGAAGCTCGTCATCTCAAATATGTTGCAGCCAAGAAGATCGTCATTCTTAAATATGTTGCAGCAGAGAAGATCGTCGTCTCAAATATGTTG
TAG
mRNA sequenceShow/hide mRNA sequence
TCACATGTGTTGCAACCGAGAAGCTCGTCATCTCAAATATGTTGCAGCCAAGAAGATCGTCATTCTTAAATATGTTGCAGCAGAGAAGATCGTCGTCTCAAATAT
GTTGTAGCTGAGAATGTCATCGT
Protein sequenceShow/hide protein sequence
MCCNREARHLKYVAAKKIVILKYVAAEKIVVSNML