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MELO3C028401 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028401
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr11:24957068..24957193
RNA-Seq ExpressionMELO3C028401
SyntenyMELO3C028401
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050760.1 pol protein [Cucumis melo var. makuwa]1.0e-0992.5Show/hide
Query:  GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL
        GRA SRVATPRSNAEEPQ I QPSRVRNAVVHTPSHAAPL
Subjt:  GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL
TYK20443.1 pol protein [Cucumis melo var. makuwa]1.0e-0992.5Show/hide
Query:  GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL
        GRA SRVATPRSNAEEPQ I QPSRVRNAVVHTPSHAAPL
Subjt:  GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL
TrEMBL top hitse value%identityAlignment
A0A5A7U6G5 Reverse transcriptase4.8e-1092.5Show/hide
Query:  GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL
        GRA SRVATPRSNAEEPQ I QPSRVRNAVVHTPSHAAPL
Subjt:  GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL
A0A5D3DA59 Reverse transcriptase4.8e-1092.5Show/hide
Query:  GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL
        GRA SRVATPRSNAEEPQ I QPSRVRNAVVHTPSHAAPL
Subjt:  GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAGGGCAGCCAGCCGCGTCGCGACGCCCCGATCCAACGCTGAGGAGCCGCAGCTGATTCGTCAGCCAAGCCGTGTCCGCAACGCCGTCGTTCACACGCCCAGCCACGC
CGCGCCGCTT
mRNA sequenceShow/hide mRNA sequence
CTGAGGAAGGGCAGCCAGCCGCGTCGCGACGCCCCGATCCAACGCTGAGGAGCCGCAGCTGATTCGTCAGCCAAGCCGTGTCCGCAACGCCGTCGTTCACACGCCCAGCC
ACGCCGCGCCGCTTAG
Protein sequenceShow/hide protein sequence
GRAASRVATPRSNAEEPQLIRQPSRVRNAVVHTPSHAAPL