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MELO3C028450 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028450
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionATP-dependent Clp protease ATP-binding subunit ClpC
Genome locationchr08:11367067..11368128
RNA-Seq ExpressionMELO3C028450
SyntenyMELO3C028450
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0072546 - ER membrane protein complex (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR044822 - Myb/SANT-like DNA-binding domain 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035695.1 trihelix transcription factor GT-2 [Cucumis melo var. makuwa]3.2e-1087.5Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        +++ EMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKAS+
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
KAA0051449.1 thioredoxin F-type [Cucumis melo var. makuwa]3.2e-1087.5Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        +++ EMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKAS+
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
TYJ96628.1 ATP-dependent DNA helicase SRS2-like protein [Cucumis melo var. makuwa]1.4e-1380.39Show/hide
Query:  KRYIGGCEELHKVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        KR  G  +E+H+ TNEMQKMGYKRS KKCKEKWENMNKYFKRTIVTGKAS+
Subjt:  KRYIGGCEELHKVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
TYK30851.1 trihelix transcription factor GT-2 [Cucumis melo var. makuwa]3.2e-1087.5Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        +++ EMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKAS+
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
XP_038895819.1 uncharacterized protein LOC120083987 [Benincasa hispida]2.5e-1076.6Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASLQMVIILD
        +++ EMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKAS+    + D
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASLQMVIILD
TrEMBL top hitse value%identityAlignment
A0A0A0LYK7 Myb-like domain-containing protein2.0e-1085Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        +++ EMQKMGYKRSAKKCKEKWENMNKYFKRT+VTGKAS+
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
A0A5A7T2L2 Trihelix transcription factor GT-21.6e-1087.5Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        +++ EMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKAS+
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
A0A5A7UDC9 Thioredoxin F-type1.6e-1087.5Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        +++ EMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKAS+
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
A0A5D3BEK7 ATP-dependent DNA helicase SRS2-like protein6.8e-1480.39Show/hide
Query:  KRYIGGCEELHKVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        KR  G  +E+H+ TNEMQKMGYKRS KKCKEKWENMNKYFKRTIVTGKAS+
Subjt:  KRYIGGCEELHKVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
A0A5D3E5I0 Trihelix transcription factor GT-21.6e-1087.5Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
        +++ EMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKAS+
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASL
SwissProt top hitse value%identityAlignment
P31541 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic6.1e-1290Show/hide
Query:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
        VI LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI+ F+
Subjt:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
P31542 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic6.1e-1290Show/hide
Query:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
        VI LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI+ F+
Subjt:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
Q2QVG9 Chaperone protein ClpC2, chloroplastic6.1e-1290Show/hide
Query:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
        VI LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI+ F+
Subjt:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
Q9FI56 Chaperone protein ClpC1, chloroplastic1.4e-1187.5Show/hide
Query:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
        VI LDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEI+ F+
Subjt:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
Q9SXJ7 Chaperone protein ClpC2, chloroplastic1.4e-1187.5Show/hide
Query:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
        VI LDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEI+ F+
Subjt:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
Arabidopsis top hitse value%identityAlignment
AT3G48870.1 Clp ATPase9.7e-1387.5Show/hide
Query:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
        VI LDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEI+ F+
Subjt:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
AT3G48870.2 Clp ATPase9.7e-1387.5Show/hide
Query:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
        VI LDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEI+ F+
Subjt:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
AT5G28300.1 Duplicated homeodomain-like superfamily protein6.1e-0762.5Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRT
        +++ +M ++GYKRSAK+CKEKWEN+NKYF++T
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRT
AT5G47660.1 Homeodomain-like superfamily protein1.4e-0656.76Show/hide
Query:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGK
        +++  M++ GY+RSAKKCKEKWENMNKY++R    G+
Subjt:  KVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGK
AT5G50920.1 CLPC homologue 19.7e-1387.5Show/hide
Query:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL
        VI LDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEI+ F+
Subjt:  VIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTATCAAAGAGATACATAGGAGGCTGTGAAGAATTGCACAAAGTAACAAATGAGATGCAGAAGATGGGTTACAAGCGTTCAGCAAAGAAGTGCAAAGAAAAATG
GGAAAATATGAACAAATATTTCAAAAGGACCATTGTAACTGGGAAGGCTAGTTTGCAAATGGTTATAATCTTGGATATGGGCCTTCTTGTAGCTGGCACAAAATATCGTG
GGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAACAAAGTGATGAAATTCTGAAATTCTTAATAAGTCACAACAGTTTTCTTGTGGTGACCCTTAAAGAT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTATCAAAGAGATACATAGGAGGCTGTGAAGAATTGCACAAAGTAACAAATGAGATGCAGAAGATGGGTTACAAGCGTTCAGCAAAGAAGTGCAAAGAAAAATG
GGAAAATATGAACAAATATTTCAAAAGGACCATTGTAACTGGGAAGGCTAGTTTGCAAATGGTTATAATCTTGGATATGGGCCTTCTTGTAGCTGGCACAAAATATCGTG
GGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAACAAAGTGATGAAATTCTGAAATTCTTAATAAGTCACAACAGTTTTCTTGTGGTGACCCTTAAAGAT
TGA
Protein sequenceShow/hide protein sequence
MEVSKRYIGGCEELHKVTNEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASLQMVIILDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEILKFLISHNSFLVVTLKD