CuGenDBv2

Gene ID	MELO3C028461
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Beta-galactosidase
Genome location	chr04:3362792..3363176
RNA-Seq Expression	MELO3C028461
Synteny	MELO3C028461
Gene Ontology terms	GO:0000723 - telomere maintenance (biological process) GO:0006303 - double-strand break repair via nonhomologous end joining (biological process) GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0043564 - Ku70:Ku80 complex (cellular component) GO:0003678 - DNA helicase activity (molecular function) GO:0003684 - damaged DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function) GO:0042162 - telomeric DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM64 Beta-galactosidase

4.2e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

A0A5A7UI74 Retrovirus-related Pol polyprotein from transposon TNT 1-94

4.2e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

A0A5A7VLQ7 Beta-galactosidase

4.2e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

A0A5D3BJK7 Beta-galactosidase

4.2e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

A0A5D3C4T4 Beta-galactosidase

4.2e-59

95.65

Show/hide

Query:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS
        M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKS
Subjt:  MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKS

Query:  IPACEHCKKQWHTKD
        IP CEHCKKQWHTKD
Subjt:  IPACEHCKKQWHTKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCATTTGTGCAGAGAGATAGTTTGGGACACACCAAATGACTGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGCAGGACTTAATCCCAA
ATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCCCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTAT
TGACTACCCCTACCATTGACTCTGCTGCCTTTAGCGCTCGGTTCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTGCGTGTGAGCACTGCAAGAAACAA
TGGCACACCAAGGATTAG

mRNA sequence

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Protein sequence

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MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQ
WHTKD

MELO3C028461 (gene) of Melon (DHL92) v4 genome