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MELO3C028467 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028467
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr08:27969976..27970401
RNA-Seq ExpressionMELO3C028467
SyntenyMELO3C028467
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037742.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-34100Show/hide
Query:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
Subjt:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
KAA0054186.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-2991.78Show/hide
Query:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        MIAEWPA  LVNDNHVRTEFF ILREMPELTSLDRALLQRHLLSRMDDL+GFVLM EDER+GFCRVLLRDITR
Subjt:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
KAA0062964.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-2991.67Show/hide
Query:  IAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        IAEWPA  L NDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDL+GFVLMPEDER+GFCRVLLRDI R
Subjt:  IAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
TYK29656.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-3297.26Show/hide
Query:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        MIAEWPACALVNDNHVRTEFF ILREMPELTSLDRALLQRHLLSRMDDL+GFVLMPEDERDGFCRVLLRDITR
Subjt:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
TYK30732.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-2989.04Show/hide
Query:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        MIAEWPACALVNDNHV T+FF ILREMPELTSLDR LLQRHLLSRMDDL+GFVLMP+DER+GFCRVLL+DITR
Subjt:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
TrEMBL top hitse value%identityAlignment
A0A5A7T2P7 Retrotransposon protein1.8e-34100Show/hide
Query:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
Subjt:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
A0A5A7UIT2 Retrotransposon protein1.0e-2991.78Show/hide
Query:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        MIAEWPA  LVNDNHVRTEFF ILREMPELTSLDRALLQRHLLSRMDDL+GFVLM EDER+GFCRVLLRDITR
Subjt:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
A0A5A7V6W3 Retrotransposon protein1.0e-2991.67Show/hide
Query:  IAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        IAEWPA  L NDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDL+GFVLMPEDER+GFCRVLLRDI R
Subjt:  IAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
A0A5D3E168 Retrotransposon protein5.7e-3397.26Show/hide
Query:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        MIAEWPACALVNDNHVRTEFF ILREMPELTSLDRALLQRHLLSRMDDL+GFVLMPEDERDGFCRVLLRDITR
Subjt:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
A0A5D3E4A2 Retrotransposon protein1.0e-2989.04Show/hide
Query:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
        MIAEWPACALVNDNHV T+FF ILREMPELTSLDR LLQRHLLSRMDDL+GFVLMP+DER+GFCRVLL+DITR
Subjt:  MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCGGAGTGGCCTGCATGCGCCCTTGTCAATGACAACCATGTTCGCACAGAATTCTTCCCCATATTACGTGAGATGCCAGAACTAACGAGTTTGGATAGGGCGCT
ATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCAGGGTTTCGTACTCATGCCTGAGGATGAGAGGGATGGATTTTGTAGAGTCCTCTTACGAGACATCACGAGAT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATAGAAACGAGGAGTTCCCGCCCGTGTACAGCTAGGGGATTGACCTGTCGCAGGACGATGTACACGCATCACGACCTTCTCGCTCTTCAGAGGGTAGGACCGA
ATCGAGTGGATCCAAGAGGAAGAGAGGAAGTCAGCGAGAGGTTGATGTTGAAGGCATACATTTGGAGCTCGACCAAACAAACAACCAACTCAAGATGATTGCGGAGTGGC
CTGCATGCGCCCTTGTCAATGACAACCATGTTCGCACAGAATTCTTCCCCATATTACGTGAGATGCCAGAACTAACGAGTTTGGATAGGGCGCTATTGCAAAGGCATCTT
CTGTCTCGTATGGACGACCTTCAGGGTTTCGTACTCATGCCTGAGGATGAGAGGGATGGATTTTGTAGAGTCCTCTTACGAGACATCACGAGATAG
Protein sequenceShow/hide protein sequence
MIAEWPACALVNDNHVRTEFFPILREMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDERDGFCRVLLRDITR