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MELO3C028476 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028476
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr02:15080581..15081156
RNA-Seq ExpressionMELO3C028476
SyntenyMELO3C028476
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025990.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.0e-1453.12Show/hide
Query:  MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTYSFDA-FVVRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPF
        MRREKGNSRR+LNPFSRR TRRREKPLFPTPLPTHCSR REK  FP Y          ++ F   +   +    GK   PDV      + VG   F
Subjt:  MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTYSFDA-FVVRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPF
KAA0033514.1 pol protein [Cucumis melo var. makuwa]4.3e-1390.91Show/hide
Query:  VRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPFSCS
        +RRERWFS+RSSRRVVEG+GKALIPDVLYADVIFGVGNAPFS S
Subjt:  VRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPFSCS
TYK18170.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]8.6e-1489.58Show/hide
Query:  MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTY
        MRREKGNSRRSLNPFSRR TRRREKPLFPTPLPTHCSR REK  FP Y
Subjt:  MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTY
TrEMBL top hitse value%identityAlignment
A0A5A7SII7 CACTA en-spm transposon protein2.4e-1453.12Show/hide
Query:  MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTYSFDA-FVVRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPF
        MRREKGNSRR+LNPFSRR TRRREKPLFPTPLPTHCSR REK  FP Y          ++ F   +   +    GK   PDV      + VG   F
Subjt:  MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTYSFDA-FVVRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPF
A0A5A7SQQ3 Pol protein2.1e-1390.91Show/hide
Query:  VRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPFSCS
        +RRERWFS+RSSRRVVEG+GKALIPDVLYADVIFGVGNAPFS S
Subjt:  VRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPFSCS
A0A5D3D337 Protein FAR1-RELATED SEQUENCE 3-like4.2e-1489.58Show/hide
Query:  MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTY
        MRREKGNSRRSLNPFSRR TRRREKPLFPTPLPTHCSR REK  FP Y
Subjt:  MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCGGGAAAAGGGGAATTCCCGACGCTCATTAAACCCCTTTTCCCGACGTTTCACGCGGCGTCGGGAAAAACCCCTATTCCCGACGCCTCTCCCGACGCACTGTTC
ACGGTGTCGGGAAAAGGGGTTTTTCCCGACGTATTCTTTCGACGCCTTCGTGGTGCGTCGGGAAAGATGGTTTTCCCGACGTAGCTCCCGACGCGTTGTTGAGGGCGTCG
GGAAAGCCCTTATTCCCGACGTTCTTTATGCCGACGTGATTTTCGGCGTCGGGAATGCTCCATTTTCTTGTAGTGGAAATTTTTTTGCTACAAAACAGAAGTGTGTTGCT
CGTAAGCTGTCTTGGTGA
mRNA sequenceShow/hide mRNA sequence
AGTGGCAGACGGCGACGAGGAACAACGGTGAGGGCGGTCGGCGACGGACGGCGGCGGAACAAAAGGATTATGCACGGCGGCGACTTCTTCTTCTTCTCCTTTCTTTTTCT
CCTCCTCTCGGTTTCGTGACGTGGCGTCAGGAAATCCCTCAAAATGCGTCGGGAAAAGGGGAATTCCCGACGCTCATTAAACCCCTTTTCCCGACGTTTCACGCGGCGTC
GGGAAAAACCCCTATTCCCGACGCCTCTCCCGACGCACTGTTCACGGTGTCGGGAAAAGGGGTTTTTCCCGACGTATTCTTTCGACGCCTTCGTGGTGCGTCGGGAAAGA
TGGTTTTCCCGACGTAGCTCCCGACGCGTTGTTGAGGGCGTCGGGAAAGCCCTTATTCCCGACGTTCTTTATGCCGACGTGATTTTCGGCGTCGGGAATGCTCCATTTTC
TTGTAGTGGAAATTTTTTTGCTACAAAACAGAAGTGTGTTGCTCGTAAGCTGTCTTGGTGAATATTCTAAATATGAAACAACTTG
Protein sequenceShow/hide protein sequence
MRREKGNSRRSLNPFSRRFTRRREKPLFPTPLPTHCSRCREKGFFPTYSFDAFVVRRERWFSRRSSRRVVEGVGKALIPDVLYADVIFGVGNAPFSCSGNFFATKQKCVA
RKLSW