; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C028484 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028484
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionV-type proton ATPase subunit a
Genome locationchr07:14101256..14102363
RNA-Seq ExpressionMELO3C028484
SyntenyMELO3C028484
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057555.1 autophagy-related protein 18g isoform X1 [Cucumis melo var. makuwa]3.2e-1998Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
TYK18276.1 autophagy-related protein 18g isoform X2 [Cucumis melo var. makuwa]3.2e-1998Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
XP_038900257.1 autophagy-related protein 18g-like isoform X1 [Benincasa hispida]4.3e-1690Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQIHPSPAK  TPPAK D HDVLRRSHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
XP_038900258.1 autophagy-related protein 18g-like isoform X2 [Benincasa hispida]4.3e-1690Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQIHPSPAK  TPPAK D HDVLRRSHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
XP_038900260.1 autophagy-related protein 18g-like isoform X3 [Benincasa hispida]4.3e-1690Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQIHPSPAK  TPPAK D HDVLRRSHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
TrEMBL top hitse value%identityAlignment
A0A0A0K530 BCAS3 domain-containing protein6.1e-1688Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQI PSPAK GTPPAK DRH++LRRSHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
A0A5A7UVG7 Autophagy-related protein 18g isoform X11.5e-1998Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
A0A5D3D409 Autophagy-related protein 18g isoform X21.5e-1998Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
A0A6J1GQE2 autophagy-related protein 18g isoform X42.8e-1382Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQ+HPSPAK  T P KPD HD+LR SHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
A0A6J1GS94 autophagy-related protein 18g isoform X22.8e-1382Show/hide
Query:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
        +SKRGGPVSFLQ+HPSPAK  T P KPD HD+LR SHPLLLIVAGEESKD
Subjt:  LSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD
SwissProt top hitse value%identityAlignment
Q8GUL1 Autophagy-related protein 18g2.9e-0752.94Show/hide
Query:  SQWLSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEES
        ++ +SKRGGPVSFLQ+ P PA+SG        H+    SHPLLL+VAG+E+
Subjt:  SQWLSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEES
Arabidopsis top hitse value%identityAlignment
AT1G03380.1 homolog of yeast autophagy 18 (ATG18) G2.1e-0852.94Show/hide
Query:  SQWLSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEES
        ++ +SKRGGPVSFLQ+ P PA+SG        H+    SHPLLL+VAG+E+
Subjt:  SQWLSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEES
AT2G21410.1 vacuolar proton ATPase A24.0e-0448.65Show/hide
Query:  MARKLRFFREQMARAGLSPSSHSLGTPDFDLDNLEFR
        MARK+RFF+EQM++AG++P        D DLD++E +
Subjt:  MARKLRFFREQMARAGLSPSSHSLGTPDFDLDNLEFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGAAGCTACGATTTTTCAGGGAGCAAATGGCAAGGGCTGGTTTATCACCATCATCCCATTCTTTAGGGACTCCTGATTTTGATCTGGATAATTTGGAGTTCCG
AGGGAAAAGTCAATGGCTTTCAAAGCGTGGTGGCCCTGTTTCATTCCTACAGATTCACCCTTCTCCAGCAAAGTCTGGTACTCCTCCAGCAAAGCCTGATAGGCATGATG
TACTCAGAAGATCACACCCTTTATTGCTGATTGTTGCAGGAGAAGAAAGCAAGGAT
mRNA sequenceShow/hide mRNA sequence
GTAGCAAGTGTAGTGCGGTATATCCGTGCTTTTGGTCTCATTTCTTGTTTCCTATTTTCGGTTAATATTTAATTGACAGCAGTTATGTGCAGTTTTTGTAAACAAAATAT
CTTATGCTTGGTTTGATGGTGTTTGTTTGCCTGCTACTTTTACCAAGCAGATTAAAAGATGTGGGGAAATGGCTCGGAAGCTACGATTTTTCAGGGAGCAAATGGCAAGG
GCTGGTTTATCACCATCATCCCATTCTTTAGGGACTCCTGATTTTGATCTGGATAATTTGGAGTTCCGAGGGAAAAGTCAATGGCTTTCAAAGCGTGGTGGCCCTGTTTC
ATTCCTACAGATTCACCCTTCTCCAGCAAAGTCTGGTACTCCTCCAGCAAAGCCTGATAGGCATGATGTACTCAGAAGATCACACCCTTTATTGCTGATTGTTGCAGGAG
AAGAAAGCAAGGAT
Protein sequenceShow/hide protein sequence
MARKLRFFREQMARAGLSPSSHSLGTPDFDLDNLEFRGKSQWLSKRGGPVSFLQIHPSPAKSGTPPAKPDRHDVLRRSHPLLLIVAGEESKD