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MELO3C028496 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028496
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description40S ribosomal protein S13-like
Genome locationchr08:17451444..17451972
RNA-Seq ExpressionMELO3C028496
SyntenyMELO3C028496
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsIPR023029 - Ribosomal protein S15P


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046917.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]2.0e-2196.3Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCNSGGEDIVCIGVILRDSHGTA+VKSVT NKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

KAA0049888.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]1.8e-22100Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

KAA0063044.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]4.1e-2298.15Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCN+GGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

TYK07625.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]4.1e-2298.15Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCNSGGEDIVCIGVILRDSHGTA+VKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

XP_008460618.1 PREDICTED: 40S ribosomal protein S13-like [Cucumis melo]1.8e-22100Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

TrEMBL top hitse value%identityAlignment
A0A1S3CCE6 40S ribosomal protein S13-like8.9e-23100Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

A0A5A7U3Q6 40S ribosomal protein S13-like8.9e-23100Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

A0A5A7UL87 40S ribosomal protein S13-like8.9e-23100Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

A0A5A7V744 40S ribosomal protein S13-like2.0e-2298.15Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCN+GGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

A0A5D3CTP1 40S ribosomal protein S13-like2.0e-2298.15Show/hide
Query:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        MQLCNSGGEDIVCIGVILRDSHGTA+VKSVTGNKILRILKAHGLAPEIPEDLYH
Subjt:  MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

SwissProt top hitse value%identityAlignment
P46298 40S ribosomal protein S131.7e-1595.12Show/hide
Query:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        IGVILRDSHG AQVKSVTG+KILRILKAHGLAPEIPEDLYH
Subjt:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

P59223 40S ribosomal protein S13-16.6e-1592.68Show/hide
Query:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        IGVILRDSHG  QVKSVTG+KILRILKAHGLAPEIPEDLYH
Subjt:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

P59224 40S ribosomal protein S13-26.6e-1592.68Show/hide
Query:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        IGVILRDSHG  QVKSVTG+KILRILKAHGLAPEIPEDLYH
Subjt:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

P62299 40S ribosomal protein S131.2e-1385.37Show/hide
Query:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        IGVILRDSHG AQV+ VTGNKI+RILKA G+APEIPEDLYH
Subjt:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

P62302 40S ribosomal protein S136.6e-1592.68Show/hide
Query:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        IGVILRDSHG AQV SVTG+KILRILKAHGLAPEIPEDLYH
Subjt:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

Arabidopsis top hitse value%identityAlignment
AT3G60770.1 Ribosomal protein S13/S154.7e-1692.68Show/hide
Query:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        IGVILRDSHG  QVKSVTG+KILRILKAHGLAPEIPEDLYH
Subjt:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH

AT4G00100.1 ribosomal protein S13A4.7e-1692.68Show/hide
Query:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH
        IGVILRDSHG  QVKSVTG+KILRILKAHGLAPEIPEDLYH
Subjt:  IGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTGTGTAATAGTGGAGGTGAGGATATAGTTTGCATCGGTGTCATTCTTCGTGATTCTCACGGTACTGCTCAGGTTAAGAGTGTTACTGGCAATAAGATCTTGCG
CATTCTTAAAGCTCATGGGCTTGCTCCGGAGATTCCTGAGGATCTTTACCATTTT
mRNA sequenceShow/hide mRNA sequence
ATGCAGCTGTGTAATAGTGGAGGTGAGGATATAGTTTGCATCGGTGTCATTCTTCGTGATTCTCACGGTACTGCTCAGGTTAAGAGTGTTACTGGCAATAAGATCTTGCG
CATTCTTAAAGCTCATGGGCTTGCTCCGGAGATTCCTGAGGATCTTTACCATTTTA
Protein sequenceShow/hide protein sequence
MQLCNSGGEDIVCIGVILRDSHGTAQVKSVTGNKILRILKAHGLAPEIPEDLYHF