CuGenDBv2

Gene ID	MELO3C028532
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3
Genome location	chr10:24877714..24878238
RNA-Seq Expression	MELO3C028532
Synteny	MELO3C028532
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0004177 - aminopeptidase activity (molecular function) GO:0008237 - metallopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR008906 - HAT, C-terminal dimerisation domain IPR012337 - Ribonuclease H-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041344.1 putative transposase [Cucumis melo var. makuwa]

1.8e-51

96.46

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVNSSRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDMTEEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSM
        MEAAFENLNNDSM
Subjt:  MEAAFENLNNDSM

KAA0060372.1 putative transposase [Cucumis melo var. makuwa]

1.8e-51

96.46

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVNSSRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDMTEEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSM
        MEAAFENLNNDSM
Subjt:  MEAAFENLNNDSM

KAA0064124.1 putative aspartyl aminopeptidase [Cucumis melo var. makuwa]

5.6e-53

94.92

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVN+SRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDM EEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSMSLEAQ
        MEAAFENLNNDSMSLEAQ
Subjt:  MEAAFENLNNDSMSLEAQ

TYK29141.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa]

1.8e-51

96.46

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVNSSRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDMTEEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSM
        MEAAFENLNNDSM
Subjt:  MEAAFENLNNDSM

TYK30761.1 putative transposase [Cucumis melo var. makuwa]

1.8e-51

96.46

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVNSSRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDMTEEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSM
        MEAAFENLNNDSM
Subjt:  MEAAFENLNNDSM

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TD23 Putative transposase

8.7e-52

96.46

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVNSSRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDMTEEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSM
        MEAAFENLNNDSM
Subjt:  MEAAFENLNNDSM

A0A5A7UWZ3 Putative transposase

8.7e-52

96.46

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVNSSRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDMTEEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSM
        MEAAFENLNNDSM
Subjt:  MEAAFENLNNDSM

A0A5A7VA60 Putative aspartyl aminopeptidase

2.7e-53

94.92

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVN+SRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDM EEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSMSLEAQ
        MEAAFENLNNDSMSLEAQ
Subjt:  MEAAFENLNNDSMSLEAQ

A0A5D3E0B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3

8.7e-52

96.46

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVNSSRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDMTEEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSM
        MEAAFENLNNDSM
Subjt:  MEAAFENLNNDSM

A0A5D3E590 Putative transposase

8.7e-52

96.46

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Query:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE
        MGDEYLDLLTWWKVNSSRFKI SQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT QT EALICAQNWIQSKPLDDMTEEIDG EEIDEEFINIGKE
Subjt:  MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKE

Query:  MEAAFENLNNDSM
        MEAAFENLNNDSM
Subjt:  MEAAFENLNNDSM

SwissProt top hits

e value

%identity

Alignment

B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 1

2.1e-10

47.95

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Query:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPS-ESAFS--TGGRVLDSFR-SSLTQTTEALICAQNWIQSKP
        D+L WWK+N+ ++   S++ARDI +IP+S V S  S FS  TG R+LD +R SS  +  EAL+CA++W+Q  P
Subjt:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPS-ESAFS--TGGRVLDSFR-SSLTQTTEALICAQNWIQSKP

P03010 Putative AC9 transposase

1.0e-12

48.48

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Query:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSL-TQTTEALICAQNWI
        D+L+WW+   + + I +Q+ARD+ +I +STV SESAFS GGRV+D +R+ L ++  EALIC ++W+
Subjt:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSL-TQTTEALICAQNWI

P08770 Putative AC transposase

1.0e-12

48.48

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Query:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSL-TQTTEALICAQNWI
        D+L+WW+   + + I +Q+ARD+ +I +STV SESAFS GGRV+D +R+ L ++  EALIC ++W+
Subjt:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSL-TQTTEALICAQNWI

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2

1.9e-11

50.68

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Query:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPS-ESAFS--TGGRVLDSFRSSL-TQTTEALICAQNWIQSKP
        D+L WWK+N+ +F   S++ARDI +IP+S V S  S FS  TG R+LD +RSSL  +  EAL+CA++W+Q  P
Subjt:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPS-ESAFS--TGGRVLDSFRSSL-TQTTEALICAQNWIQSKP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 3

3.2e-11

45.95

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Query:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSE----SAFSTGGRVLDSFRSSL-TQTTEALICAQNWIQSKP
        ++L WWK+N+ +F   S++ARD+ +IP+S V S     SA +TG ++LD +RSSL  +T EAL CA++W+Q  P
Subjt:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSE----SAFSTGGRVLDSFRSSL-TQTTEALICAQNWIQSKP

Arabidopsis top hits

e value

%identity

Alignment

AT1G18560.1 BED zinc finger ;hAT family dimerisation domain

1.1e-06

32.35

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Query:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQS
        D+L WWKVNS R+   S +ARD  ++  ++   E  F   G  +D  +  +   +T+++IC ++WI++
Subjt:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLT-QTTEALICAQNWIQS

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain

4.8e-10

42.42

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Query:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSL-TQTTEALICAQNWI
        D+L WWK N  ++   S++ARDI SIP+S    +  F    R +D +++SL  +T EALICA+ W+
Subjt:  DLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSL-TQTTEALICAQNWI

Sequences

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CDS sequence

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ATGGGCGATGAATATTTAGATTTGCTAACTTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCACTAGCCAAGTAGCTAGGGACATCTATAGTATTCCTATATCA
ACTGTGCCTTCGGAGTCCGCCTTTAGTACTGGAGGACGGGTGTTAGATTCTTTTCGAAGTTCTTTAACTCAAACTACAGAGGCACTCATTTGTGCTCAGAATTGG
ATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGACTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAGCTGCATTTGAG
AATTTGAATAATGACTCTATGAGTCTTGAAGCTCAGTGA

mRNA sequence

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Protein sequence

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MGDEYLDLLTWWKVNSSRFKITSQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTQTTEALICAQNWIQSKPLDDMTEEIDGTEEIDEEFINIGKEMEAAFE
NLNNDSMSLEAQ

MELO3C028532 (gene) of Melon (DHL92) v4 genome