CuGenDBv2

Gene ID	MELO3C028578
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	type IV secretion system protein virB10-like
Genome location	chr01:230922..231333
RNA-Seq Expression	MELO3C028578
Synteny	MELO3C028578
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8645870.1 hypothetical protein Csa_017149 [Cucumis sativus]

2.4e-60

94.03

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDWVEKKCASCLDGSLD    PPPPPPHLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQG--ADADAKGENLQSAAPGTGG
        EPLGGPPPEIKQ   ADADAKGENLQSAAPGTGG
Subjt:  EPLGGPPPEIKQG--ADADAKGENLQSAAPGTGG

KAG6571994.1 hypothetical protein SDJN03_28722, partial [Cucurbita argyrosperma subsp. sororia]

6.4e-53

85.82

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTP+DQLQPPP  HS + SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD   PPPPPPPHLRHPPPLD+VPV 
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES
        EPLGG PPEIKQG  AD K ENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES

KAG7011671.1 hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.9e-55

88.06

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD PPPPPPPPPHLRHPPPLD+VPV 
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES
        EPLGG PPEIKQG  AD K ENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES

XP_008455516.1 PREDICTED: type IV secretion system protein virB10-like [Cucumis melo]

9.2e-68

100

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES
        EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES

XP_038887147.1 uncharacterized protein LOC120077337 [Benincasa hispida]

2.5e-57

87.86

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTP+DQLQPPP LHS+HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDW+EKKCASCLDGSLD   PPPPPPPHLR PP LDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQGADADA------KGENLQSAAPGTGGES
        EPLGGPPPEIKQGADADA      K ENLQSA PGTGGES
Subjt:  EPLGGPPPEIKQGADADA------KGENLQSAAPGTGGES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6N4 Uncharacterized protein

1.4e-61

94.12

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDWVEKKCASCLDGSLD    PPPPPPHLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQG--ADADAKGENLQSAAPGTGGES
        EPLGGPPPEIKQ   ADADAKGENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQG--ADADAKGENLQSAAPGTGGES

A0A1S3C1T9 type IV secretion system protein virB10-like

4.5e-68

100

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES
        EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES

A0A5A7SPN0 Type IV secretion system protein virB10-like

4.5e-68

100

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES
        EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGGES

A0A6J1GL66 uncharacterized protein LOC111455383

2.6e-52

85.61

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTP+DQLQPPP  HS + SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD   PPPPPPPHLRHPPPLD+VPV 
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGG
        EPLGG PPEIKQG  AD K ENLQSAAPGTGG
Subjt:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGG

A0A6J1IBA8 uncharacterized protein LOC111470940

2.9e-51

84.85

Show/hide

Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA
        MSTP DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD    PPPPP HLRHPPPLD+VPV 
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGG
        EPLGG PPEIKQG  AD K ENLQSAAPGTGG
Subjt:  EPLGGPPPEIKQGADADAKGENLQSAAPGTGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G26520.1 unknown protein

2.6e-12

36.92

Show/hide

Query:  QPPPPLHSS----------HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVP
        QPPP    S          ++++GP IAV  V+++L V+A +IGRLCSG+ + GYG  YD+E W E +C SC+DG + P  P P P P  R P    S  
Subjt:  QPPPPLHSS----------HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVP

Query:  VAEPLGGPPPEIKQGADADAKGENLQSAAP
        V+    G   ++    D + K ++L    P
Subjt:  VAEPLGGPPPEIKQGADADAKGENLQSAAP

AT3G57500.1 unknown protein

3.7e-14

Show/hide

Query:  QPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDG-----SLDPPPPPPPPP
        Q  P  +S H S+  L+ VLAVI+IL V+AG+  RLC GR +  +G  +D+E WVE+KC SC+D      S  P PPPPPPP
Subjt:  QPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDG-----SLDPPPPPPPPP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCCACCCCCATCGACCAACTCCAGCCCCCCCCTCCCCTTCACTCCTCCCACGCCTCCGTCGGCCCACTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGC
GTCATTGCCGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACGTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGC
CTCGATGGCTCCCTCGACCCTCCTCCTCCTCCTCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCCGAACCTCTTGGTGGG
CCACCGCCGGAGATCAAACAAGGCGCCGATGCCGATGCCAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACTGGCGGTGAGTCATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVAEPLGG
PPPEIKQGADADAKGENLQSAAPGTGGES

MELO3C028578 (gene) of Melon (DHL92) v4 genome