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MELO3C028606 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028606
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:1570510..1572565
RNA-Seq ExpressionMELO3C028606
SyntenyMELO3C028606
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]1.9e-1432.61Show/hide
Query:  EIAEFQKIGKI--SARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP
        EIAE   +  I  + R     PD+R W +E  G F  KS  + L  ++ +    + ++WK  +P +    VW+   G +N    +Q++ P  CL PS C 
Subjt:  EIAEFQKIGKI--SARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP

Query:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDK
        FC ++ E+  HLF  C YS K W ++L      WV  K
Subjt:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDK

KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]1.8e-2542.36Show/hide
Query:  EEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP
        EEI EFQ  +  +S  ++  + D R WS+ES+GRF  KSL+THL  +SP+D  L  A+ ++ SPRR N+L+W+++F  +  S +LQ+K P   + PSICP
Subjt:  EEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP

Query:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV
         CL+  ++  H+F  CP S+  WE++ S+FN+ W  D   S +V
Subjt:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]1.6e-2643.06Show/hide
Query:  EEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP
        EEI EFQ  +  +S  ++  + D R WS+ES+GRF  KSL+THL  +SP+D  L  A+ ++ SPRR N+L+W+++F  +N S +LQ+K P   + PSICP
Subjt:  EEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP

Query:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV
         CL+  ++  H+F  CP S+  WE++ S+FN+ W  D   S +V
Subjt:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]1.5e-1646.59Show/hide
Query:  ALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICPFCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV
        ALWKT SPRR NV  W+L  G LN + ++Q+K P+  L PS C  C + GED  HLFF C +++KCW  L   FN+ W  D    + V
Subjt:  ALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICPFCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]2.8e-3445.62Show/hide
Query:  NAFVSFKNTKNKKNGHEEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSV
        N   S+  T  +    EE++ FQ  + KI +R  S + DKR+WS+ +N ++ VKSL  HL+P SPL+  +   +WKT SPRR N+L+W++LFG LN++ V
Subjt:  NAFVSFKNTKNKKNGHEEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSV

Query:  LQQKLPAGCLFPSICPFCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV
        LQ+K P   L P++CPFCL H E   HLFF CPYS+ CW KLL  FN+      D+   V
Subjt:  LQQKLPAGCLFPSICPFCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV

TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein8.7e-2642.36Show/hide
Query:  EEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP
        EEI EFQ  +  +S  ++  + D R WS+ES+GRF  KSL+THL  +SP+D  L  A+ ++ SPRR N+L+W+++F  +  S +LQ+K P   + PSICP
Subjt:  EEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP

Query:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV
         CL+  ++  H+F  CP S+  WE++ S+FN+ W  D   S +V
Subjt:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV

A0A5D3DE60 zf-RVT domain-containing protein7.8e-2743.06Show/hide
Query:  EEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP
        EEI EFQ  +  +S  ++  + D R WS+ES+GRF  KSL+THL  +SP+D  L  A+ ++ SPRR N+L+W+++F  +N S +LQ+K P   + PSICP
Subjt:  EEIAEFQK-IGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP

Query:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV
         CL+  ++  H+F  CP S+  WE++ S+FN+ W  D   S +V
Subjt:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV

A0A5H2XQW2 TatD related DNase9.0e-1532.61Show/hide
Query:  EIAEFQKIGKI--SARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP
        EIAE   +  I  + R     PD+R W +E  G F  KS  + L  ++ +    + ++WK  +P +    VW+   G +N    +Q++ P  CL PS C 
Subjt:  EIAEFQKIGKI--SARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICP

Query:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDK
        FC ++ E+  HLF  C YS K W ++L      WV  K
Subjt:  FCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDK

A0A6J1DIE2 uncharacterized protein LOC1110207657.4e-1746.59Show/hide
Query:  ALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICPFCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV
        ALWKT SPRR NV  W+L  G LN + ++Q+K P+  L PS C  C + GED  HLFF C +++KCW  L   FN+ W  D    + V
Subjt:  ALWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICPFCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV

A5BZ69 Reverse transcriptase domain-containing protein3.4e-1436.29Show/hide
Query:  PDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMA-LWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICPFCLQHGEDPSHLFFLCPYSA
        PDKR WS+  +G F VKS    LS  S    V     +W +  P +    VW++    LN + +LQ + P   L P+IC  C++HGE   HLF  C  + 
Subjt:  PDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMA-LWKTNSPRRANVLVWVLLFGHLNMSSVLQQKLPAGCLFPSICPFCLQHGEDPSHLFFLCPYSA

Query:  KCWEKLLSVFNMSWVSDKDYSETV
          W +L  +  M WVS +  SE V
Subjt:  KCWEKLLSVFNMSWVSDKDYSETV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAATGCATTTGTATCTTTCAAAAATACAAAAAATAAGAAGAACGGACATGAAGAGATAGCAGAATTTCAGAAGATTGGTAAAATTTCAGCAAGGAGAATT
TCTGAGGCACCTGACAAAAGAATTTGGTCCCTAGAGAGTAATGGAAGATTTTTGGTAAAATCTCTCACAACTCATCTTTCCCCATCTTCACCTTTGGATAATGTG
TTGCACATGGCTTTATGGAAGACTAATAGTCCAAGAAGAGCTAACGTTCTTGTTTGGGTTTTGTTGTTTGGTCATTTGAACATGTCTTCAGTATTGCAGCAAAAA
TTGCCAGCTGGTTGCCTTTTCCCTTCAATCTGCCCATTCTGTCTTCAGCATGGAGAAGATCCGTCTCATCTGTTTTTCCTTTGTCCATACTCAGCTAAGTGCTGG
GAAAAATTGCTCTCCGTTTTTAATATGTCATGGGTTTCTGATAAGGACTACAGTGAAACGGTT
mRNA sequenceShow/hide mRNA sequence
ATGAGCAATGCATTTGTATCTTTCAAAAATACAAAAAATAAGAAGAACGGACATGAAGAGATAGCAGAATTTCAGAAGATTGGTAAAATTTCAGCAAGGAGAATT
TCTGAGGCACCTGACAAAAGAATTTGGTCCCTAGAGAGTAATGGAAGATTTTTGGTAAAATCTCTCACAACTCATCTTTCCCCATCTTCACCTTTGGATAATGTG
TTGCACATGGCTTTATGGAAGACTAATAGTCCAAGAAGAGCTAACGTTCTTGTTTGGGTTTTGTTGTTTGGTCATTTGAACATGTCTTCAGTATTGCAGCAAAAA
TTGCCAGCTGGTTGCCTTTTCCCTTCAATCTGCCCATTCTGTCTTCAGCATGGAGAAGATCCGTCTCATCTGTTTTTCCTTTGTCCATACTCAGCTAAGTGCTGG
GAAAAATTGCTCTCCGTTTTTAATATGTCATGGGTTTCTGATAAGGACTACAGTGAAACGGTT
Protein sequenceShow/hide protein sequence
MSNAFVSFKNTKNKKNGHEEIAEFQKIGKISARRISEAPDKRIWSLESNGRFLVKSLTTHLSPSSPLDNVLHMALWKTNSPRRANVLVWVLLFGHLNMSSVLQQK
LPAGCLFPSICPFCLQHGEDPSHLFFLCPYSAKCWEKLLSVFNMSWVSDKDYSETV