; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C028648 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028648
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr01:2854852..2860975
RNA-Seq ExpressionMELO3C028648
SyntenyMELO3C028648
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040268.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]5.5e-10598.01Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
        ACGDLGLCEMEMEIH QVEVCVWDSDNVNNSLVAK MFDKMPV DLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI

Query:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
        HCYAVRNNY TLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
Subjt:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG

Query:  K
        K
Subjt:  K

XP_016901669.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like isoform X1 [Cucumis melo]1.6e-10992.73Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
        ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI

Query:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
        HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
Subjt:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG

Query:  KTNPSRVSSYVYLSNIYAAT
        K+  S ++      N +  T
Subjt:  KTNPSRVSSYVYLSNIYAAT

XP_016901670.1 PREDICTED: pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isoform X2 [Cucumis melo]1.6e-10992.73Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
        ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI

Query:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
        HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
Subjt:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG

Query:  KTNPSRVSSYVYLSNIYAAT
        K+  S ++      N +  T
Subjt:  KTNPSRVSSYVYLSNIYAAT

XP_016901671.1 PREDICTED: pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isoform X3 [Cucumis melo]3.0e-10392.42Show/hide
Query:  MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNY
        MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNY
Subjt:  MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNY

Query:  CTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKTNPSRVSS
        CTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK+  S ++ 
Subjt:  CTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKTNPSRVSS

Query:  YVYLSNIYAAT
             N +  T
Subjt:  YVYLSNIYAAT

XP_038887372.1 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benincasa hispida]5.2e-8744.58Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSL-----------VAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL
        ACGDLGL E+ MEIH QVE+C W+SD  VNNSL           VA+K+FDKMP  DLTSWNTMISGYVRNNN+MEALTI YL  K  LKADGTTLLALL
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSL-----------VAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL

Query:  TS---LAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIV
        T+   LAAIKQGKEIHCYAVRNNY TLN+FLMNSLIDMYSNCS VAAARQLFEELK KDTVSWNSIISC+Q SGDAFESLRLF Q L EDTAA DEITIV
Subjt:  TS---LAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIV

Query:  SVLGACEKITALQFGK------------------------------------------------------------------------------------
        +VLGACEKI ALQFGK                                                                                    
Subjt:  SVLGACEKITALQFGK------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------TNPSRVS
                                                                                                     TNPS+VS
Subjt:  ---------------------------------------------------------------------------------------------TNPSRVS

Query:  SYVYLSNIYAATKQWTGVE----------------------------------------------KDISWRLKEKGYKPDTSPVLYDVDEEQKEKMLW
        SY+ LSNIYAA KQWT VE                                              KDISWRLKE+GYKPDTSPVLYDV+EEQKEKMLW
Subjt:  SYVYLSNIYAATKQWTGVE----------------------------------------------KDISWRLKEKGYKPDTSPVLYDVDEEQKEKMLW

TrEMBL top hitse value%identityAlignment
A0A1S4E0B7 pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isoform X31.5e-10392.42Show/hide
Query:  MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNY
        MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNY
Subjt:  MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNY

Query:  CTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKTNPSRVSS
        CTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK+  S ++ 
Subjt:  CTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKTNPSRVSS

Query:  YVYLSNIYAAT
             N +  T
Subjt:  YVYLSNIYAAT

A0A1S4E0C9 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like isoform X18.0e-11092.73Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
        ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI

Query:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
        HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
Subjt:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG

Query:  KTNPSRVSSYVYLSNIYAAT
        K+  S ++      N +  T
Subjt:  KTNPSRVSSYVYLSNIYAAT

A0A1S4E107 pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isoform X28.0e-11092.73Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
        ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI

Query:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
        HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
Subjt:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG

Query:  KTNPSRVSSYVYLSNIYAAT
        K+  S ++      N +  T
Subjt:  KTNPSRVSSYVYLSNIYAAT

A0A5A7TBH8 Pentatricopeptide repeat-containing protein2.7e-10598.01Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
        ACGDLGLCEMEMEIH QVEVCVWDSDNVNNSLVAK MFDKMPV DLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEI

Query:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
        HCYAVRNNY TLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG
Subjt:  HCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFG

Query:  K
        K
Subjt:  K

A0A6J1GMH0 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial1.4e-8543.57Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSL-----------VAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL
        ACGDLGL EM  EIH QVEVC WDSD  VNNSL           VA+K+FDKMP  D TSWNT+ISGYVRNNNAMEAL I YL GK+ LKADGTTLLALL
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSL-----------VAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL

Query:  TS---LAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIV
        ++   LAAIKQGKEIHCYA+RNNY + N+FLMNSLIDMYSNC+SVA ARQLFEELK KDTVSWNSIISCYQ SGDAFESLRLF Q LIE+TAA DEIT+V
Subjt:  TS---LAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIV

Query:  SVLGACEKITALQFGK------------------------------------------------------------------------------------
        +VLGACEKITALQFGK                                                                                    
Subjt:  SVLGACEKITALQFGK------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------TNPSRVS
                                                                                                     TNP+RVS
Subjt:  ---------------------------------------------------------------------------------------------TNPSRVS

Query:  SYVYLSNIYAATKQWTGVE----------------------------------------------KDISWRLKEKGYKPDTSPVLYDVDEEQKEKMLW
        SY+ LSNIYAA KQWT VE                                              KDISWRLKEKG+KPDTS +LYDV+EEQKEKMLW
Subjt:  SYVYLSNIYAATKQWTGVE----------------------------------------------KDISWRLKEKGYKPDTSPVLYDVDEEQKEKMLW

SwissProt top hitse value%identityAlignment
O64705 Pentatricopeptide repeat-containing protein At2g344003.9e-2129.66Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL
        AC  L    +   +H  +     + D ++N+SL+           A+K+FD++   D  SWN+MISGY     A +A+ +     +   + D  TL+++L
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL

Query:  ---TSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAAS-DEITI
           + L  ++ G+ +   A+      L+ FL + LI MY  C  + +AR++F ++  KD V+W ++I+ Y  +G + E+ +LF++  +E T  S D  T+
Subjt:  ---TSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAAS-DEITI

Query:  VSVLGACEKITALQFGKTNPSRVSSYVYLSNIYAAT
         +VL AC  + AL+ GK   +  S      NIY AT
Subjt:  VSVLGACEKITALQFGKTNPSRVSSYVYLSNIYAAT

Q3E6Q1 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic8.4e-2434.5Show/hide
Query:  AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAA---IKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSV
        A+K+FD+MP  DL SWNT+++GY +N  A  AL ++    +  LK    T++++L +++A   I  GKEIH YA+R+ + +L + +  +L+DMY+ C S+
Subjt:  AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAA---IKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSV

Query:  AAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK
          ARQLF+ +  ++ VSWNS+I  Y  + +  E++ L +Q ++++     +++++  L AC  +  L+ G+
Subjt:  AAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic1.4e-2334.5Show/hide
Query:  AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLA---AIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSV
        A+K+FD++PV D+ SWN MISGY    N  EAL +     K+ ++ D +T++ ++++ A   +I+ G+++H +   + + + N  ++N+LID+YS C  +
Subjt:  AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLA---AIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSV

Query:  AAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK
          A  LFE L  KD +SWN++I  Y H     E+L LF Q ++      +++T++S+L AC  + A+  G+
Subjt:  AAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK

Q9M1V3 Pentatricopeptide repeat-containing protein At3g63370, chloroplastic2.3e-2131.02Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL
        A G L      ME+H  V    WDS+  V N+L+             + F +M   DL SW T+I+GY +N+  +EAL +     K  ++ D   L ++L
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL

Query:  TSLAAIKQ---GKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIV
         + + +K     KEIHC+ +R     L+  + N L+D+Y  C ++  A ++FE +K KD VSW S+IS    +G+  E++ LF + ++E   ++D + ++
Subjt:  TSLAAIKQ---GKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIV

Query:  SVLGACEKITALQFGK
         +L A   ++AL  G+
Subjt:  SVLGACEKITALQFGK

Q9SS60 Pentatricopeptide repeat-containing protein At3g035803.9e-2135.11Show/hide
Query:  VNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTS---LAAIKQGKEIHCYAVRNNYCTLN
        VNN LV           A+++FD+M V D  S+NTMI GY++     E++  M+L    + K D  T+ ++L +   L  +   K I+ Y ++  +  L 
Subjt:  VNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTS---LAAIKQGKEIHCYAVRNNYCTLN

Query:  DFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK
          + N LID+Y+ C  +  AR +F  ++ KDTVSWNSIIS Y  SGD  E+++LF   +I +  A D IT + ++    ++  L+FGK
Subjt:  DFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-2434.5Show/hide
Query:  AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLA---AIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSV
        A+K+FD++PV D+ SWN MISGY    N  EAL +     K+ ++ D +T++ ++++ A   +I+ G+++H +   + + + N  ++N+LID+YS C  +
Subjt:  AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLA---AIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSV

Query:  AAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK
          A  LFE L  KD +SWN++I  Y H     E+L LF Q ++      +++T++S+L AC  + A+  G+
Subjt:  AAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK

AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein6.0e-2534.5Show/hide
Query:  AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAA---IKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSV
        A+K+FD+MP  DL SWNT+++GY +N  A  AL ++    +  LK    T++++L +++A   I  GKEIH YA+R+ + +L + +  +L+DMY+ C S+
Subjt:  AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAA---IKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSV

Query:  AAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK
          ARQLF+ +  ++ VSWNS+I  Y  + +  E++ L +Q ++++     +++++  L AC  +  L+ G+
Subjt:  AAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK

AT2G34400.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.8e-2229.66Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL
        AC  L    +   +H  +     + D ++N+SL+           A+K+FD++   D  SWN+MISGY     A +A+ +     +   + D  TL+++L
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL

Query:  ---TSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAAS-DEITI
           + L  ++ G+ +   A+      L+ FL + LI MY  C  + +AR++F ++  KD V+W ++I+ Y  +G + E+ +LF++  +E T  S D  T+
Subjt:  ---TSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAAS-DEITI

Query:  VSVLGACEKITALQFGKTNPSRVSSYVYLSNIYAAT
         +VL AC  + AL+ GK   +  S      NIY AT
Subjt:  VSVLGACEKITALQFGKTNPSRVSSYVYLSNIYAAT

AT3G03580.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-2235.11Show/hide
Query:  VNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTS---LAAIKQGKEIHCYAVRNNYCTLN
        VNN LV           A+++FD+M V D  S+NTMI GY++     E++  M+L    + K D  T+ ++L +   L  +   K I+ Y ++  +  L 
Subjt:  VNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTS---LAAIKQGKEIHCYAVRNNYCTLN

Query:  DFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK
          + N LID+Y+ C  +  AR +F  ++ KDTVSWNSIIS Y  SGD  E+++LF   +I +  A D IT + ++    ++  L+FGK
Subjt:  DFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGK

AT3G63370.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-2231.02Show/hide
Query:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL
        A G L      ME+H  V    WDS+  V N+L+             + F +M   DL SW T+I+GY +N+  +EAL +     K  ++ D   L ++L
Subjt:  ACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALL

Query:  TSLAAIKQ---GKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIV
         + + +K     KEIHC+ +R     L+  + N L+D+Y  C ++  A ++FE +K KD VSW S+IS    +G+  E++ LF + ++E   ++D + ++
Subjt:  TSLAAIKQ---GKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIV

Query:  SVLGACEKITALQFGK
         +L A   ++AL  G+
Subjt:  SVLGACEKITALQFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTTTAGACTATGATAACGGTTCTTCCCATGATTGCCATTGCCAAAGCTACTCTTGGACCATTCATACTTCAGAAAGCAAACATTTGCAAGAAATCTCT
TCATACAACCATTATAAGCAAAGCAACCCCAACTCCCCTCTGACAGTCCCACTTACTCACCAACACAAAATCTTTCGCAAAAGGCCGGAAACTGCATGCCTATAT
GCTCACGCGTGTGGTGATCTGGGTCTTTGTGAAATGGAAATGGAAATTCATTGTCAGGTGGAGGTTTGTGTGTGGGACTCAGATAATGTGAACAATTCTCTTGTA
GCAAAAAAGATGTTTGATAAAATGCCTGTGAGCGATTTAACTTCTTGGAATACTATGATTTCAGGTTACGTGAGGAATAACAACGCCATGGAAGCTTTAACGATT
ATGTATCTAACGGGGAAGTCTGAGTTGAAAGCAGATGGGACTACTTTGCTTGCCCTCCTCACTAGCTTGGCTGCAATTAAGCAGGGGAAGGAAATCCATTGTTAT
GCTGTACGCAATAATTATTGTACTTTGAATGACTTCTTGATGAACTCGCTGATTGATATGTACTCAAATTGCAGTTCTGTTGCTGCCGCTAGGCAATTATTCGAG
GAGTTGAAAACTAAAGATACTGTATCGTGGAATTCTATAATTTCCTGCTATCAACATAGTGGAGATGCTTTTGAAAGTTTAAGACTTTTCTATCAAACGCTAATT
GAAGACACAGCAGCTTCAGATGAGATAACTATCGTTTCCGTCCTTGGTGCTTGTGAAAAGATTACAGCCTTGCAATTTGGGAAAACAAATCCATCAAGGGTTAGT
AGCTACGTTTATCTTTCCAATATTTATGCTGCTACGAAACAATGGACTGGTGTGGAAAAGGATATAAGTTGGCGACTCAAGGAGAAAGGGTACAAGCCCGATACT
AGTCCAGTGTTATATGATGTTGATGAAGAACAAAAAGAGAAGATGCTCTGGATCATAGAGTTTGTTACAAAGTCGAAGAGGGGAAAGGTGATGCATAGTTCAGCT
ATTTCTCAGAGCCACAGTTGGCTAACCCCTATCTCAAAGAGGAATGACTTGGCAGACATGCTTCGTTGGATTGTTGATGTCGATTCCACAGTCATGTGGAATTTG
AAGATTTGA
mRNA sequenceShow/hide mRNA sequence
GCGAATTTTATACATGATTCCCCTCCAGAAAAAATTAAAAGTTCAAACTATGTAGTTATGGTTTCTTTAGACTATGATAACGGTTCTTCCCATGATTGCCATTGC
CAAAGCTACTCTTGGACCATTCATACTTCAGAAAGCAAACATTTGCAAGAAATCTCTTCATACAACCATTATAAGCAAAGCAACCCCAACTCCCCTCTGACAGTC
CCACTTACTCACCAACACAAAATCTTTCGCAAAAGGCCGGAAACTGCATGCCTATATGCTCACGCGTGTGGTGATCTGGGTCTTTGTGAAATGGAAATGGAAATT
CATTGTCAGGTGGAGGTTTGTGTGTGGGACTCAGATAATGTGAACAATTCTCTTGTAGCAAAAAAGATGTTTGATAAAATGCCTGTGAGCGATTTAACTTCTTGG
AATACTATGATTTCAGGTTACGTGAGGAATAACAACGCCATGGAAGCTTTAACGATTATGTATCTAACGGGGAAGTCTGAGTTGAAAGCAGATGGGACTACTTTG
CTTGCCCTCCTCACTAGCTTGGCTGCAATTAAGCAGGGGAAGGAAATCCATTGTTATGCTGTACGCAATAATTATTGTACTTTGAATGACTTCTTGATGAACTCG
CTGATTGATATGTACTCAAATTGCAGTTCTGTTGCTGCCGCTAGGCAATTATTCGAGGAGTTGAAAACTAAAGATACTGTATCGTGGAATTCTATAATTTCCTGC
TATCAACATAGTGGAGATGCTTTTGAAAGTTTAAGACTTTTCTATCAAACGCTAATTGAAGACACAGCAGCTTCAGATGAGATAACTATCGTTTCCGTCCTTGGT
GCTTGTGAAAAGATTACAGCCTTGCAATTTGGGAAAACAAATCCATCAAGGGTTAGTAGCTACGTTTATCTTTCCAATATTTATGCTGCTACGAAACAATGGACT
GGTGTGGAAAAGGATATAAGTTGGCGACTCAAGGAGAAAGGGTACAAGCCCGATACTAGTCCAGTGTTATATGATGTTGATGAAGAACAAAAAGAGAAGATGCTC
TGGATCATAGAGTTTGTTACAAAGTCGAAGAGGGGAAAGGTGATGCATAGTTCAGCTATTTCTCAGAGCCACAGTTGGCTAACCCCTATCTCAAAGAGGAATGAC
TTGGCAGACATGCTTCGTTGGATTGTTGATGTCGATTCCACAGTCATGTGGAATTTGAAGATTTGA
Protein sequenceShow/hide protein sequence
MVSLDYDNGSSHDCHCQSYSWTIHTSESKHLQEISSYNHYKQSNPNSPLTVPLTHQHKIFRKRPETACLYAHACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLV
AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFE
ELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKTNPSRVSSYVYLSNIYAATKQWTGVEKDISWRLKEKGYKPDT
SPVLYDVDEEQKEKMLWIIEFVTKSKRGKVMHSSAISQSHSWLTPISKRNDLADMLRWIVDVDSTVMWNLKI