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MELO3C028672 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028672
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 reverse transcriptase isogeny
Genome locationchr11:15853817..15854302
RNA-Seq ExpressionMELO3C028672
SyntenyMELO3C028672
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]2.5e-0467.65Show/hide
Query:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLG
        MANA +E+F ++L+L +ITSIIC+PKGEQVWV G
Subjt:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLG
KAA0062632.1 uncharacterized protein E6C27_scaffold79G001430 [Cucumis melo var. makuwa]4.6e-0671.43Show/hide
Query:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLGI
        MAN R+EEFENKLHL + TSIIC PKG QVW +G+
Subjt:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLGI
TYJ98051.1 LINE-1 reverse transcriptase isogeny [Cucumis melo var. makuwa]4.6e-0671.43Show/hide
Query:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLGI
        MAN R+EEFENKLHL + TSIIC PKG QVW +G+
Subjt:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLGI
TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]8.7e-0572.73Show/hide
Query:  MANARQEEFENKLHLDEITSIICIPKGEQVWVL
        MAN  +EEF+  LH+DEITSI C+PKGEQVWVL
Subjt:  MANARQEEFENKLHLDEITSIICIPKGEQVWVL
TrEMBL top hitse value%identityAlignment
A0A5A7V332 Uncharacterized protein2.2e-0671.43Show/hide
Query:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLGI
        MAN R+EEFENKLHL + TSIIC PKG QVW +G+
Subjt:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLGI
A0A5D3BHD0 LINE-1 reverse transcriptase isogeny2.2e-0671.43Show/hide
Query:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLGI
        MAN R+EEFENKLHL + TSIIC PKG QVW +G+
Subjt:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLGI
A0A5D3C951 Uncharacterized protein4.2e-0572.73Show/hide
Query:  MANARQEEFENKLHLDEITSIICIPKGEQVWVL
        MAN  +EEF+  LH+DEITSI C+PKGEQVWVL
Subjt:  MANARQEEFENKLHLDEITSIICIPKGEQVWVL
A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein1.2e-0467.65Show/hide
Query:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLG
        MANA +E+F ++L+L +ITSIIC+PKGEQVWV G
Subjt:  MANARQEEFENKLHLDEITSIICIPKGEQVWVLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACGCGCGTCAGGAGGAGTTTGAAAACAAACTCCACCTTGACGAGATAACTTCCATCATTTGTATCCCAAAAGGAGAACAAGTGTGGGTATTAGGTATAGTTTA
A
mRNA sequenceShow/hide mRNA sequence
TGTATACTGCCAACTACCCAAGAGGGCAAGTAGCAAGGATATGGCTAACGCGCGTCAGGAGGAGTTTGAAAACAAACTCCACCTTGACGAGATAACTTCCATCATTTGTA
TCCCAAAAGGAGAACAAGTGTGGGTATTAGGTATAGTTTAAACTTACACTCATTCA
Protein sequenceShow/hide protein sequence
MANARQEEFENKLHLDEITSIICIPKGEQVWVLGIV