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MELO3C028678 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028678
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionArf-GAP domain-containing protein
Genome locationchr01:3831534..3833847
RNA-Seq ExpressionMELO3C028678
SyntenyMELO3C028678
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051345.1 RHOMBOID-like protein 12 [Cucumis melo var. makuwa]7.6e-0648.15Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKI---------------------CFDCNAKREAVKIIRSRSFWGNDPVRVQGLKSDESC
        MAS+SFIDKNVVFKRLKAKSENKI                      F            +SRSFWGNDPVR Q L+ D  C
Subjt:  MASNSFIDKNVVFKRLKAKSENKI---------------------CFDCNAKREAVKIIRSRSFWGNDPVRVQGLKSDESC

KAA0062232.1 RHOMBOID-like protein 12 [Cucumis melo var. makuwa]1.7e-0549.33Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKI---------------------CFDCNAKREAVKIIRSRSFWGNDPVRVQGL
        MAS+SFIDKNVVFKRLK KSENKI                      F            +SRSFWGNDPVR QGL
Subjt:  MASNSFIDKNVVFKRLKAKSENKI---------------------CFDCNAKREAVKIIRSRSFWGNDPVRVQGL

KAF3449442.1 hypothetical protein FNV43_RR10170 [Rhamnella rubrinervis]1.7e-0587.1Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS+SF DKNVVFK+LKAKSENK+CFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

XP_008465980.1 PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9 [Cucumis melo]1.0e-0590.32Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS+SF DKN VFKRLKAKSENKICFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

XP_011652650.1 probable ADP-ribosylation factor GTPase-activating protein AGD9 [Cucumis sativus]1.0e-0590.32Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS+SF DKN VFKRLKAKSENKICFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

TrEMBL top hitse value%identityAlignment
A0A0A0LF23 Arf-GAP domain-containing protein4.8e-0690.32Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS+SF DKN VFKRLKAKSENKICFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

A0A166F7G2 Arf-GAP domain-containing protein1.1e-0583.87Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS SF+DKN VFK+LKAKSENK+CFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

A0A1S3CQ59 probable ADP-ribosylation factor GTPase-activating protein AGD94.8e-0690.32Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS+SF DKN VFKRLKAKSENKICFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

A0A5A7UCH8 RHOMBOID-like protein 123.7e-0648.15Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKI---------------------CFDCNAKREAVKIIRSRSFWGNDPVRVQGLKSDESC
        MAS+SFIDKNVVFKRLKAKSENKI                      F            +SRSFWGNDPVR Q L+ D  C
Subjt:  MASNSFIDKNVVFKRLKAKSENKI---------------------CFDCNAKREAVKIIRSRSFWGNDPVRVQGLKSDESC

A0A5A7V1Y4 RHOMBOID-like protein 128.2e-0649.33Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKI---------------------CFDCNAKREAVKIIRSRSFWGNDPVRVQGL
        MAS+SFIDKNVVFKRLK KSENKI                      F            +SRSFWGNDPVR QGL
Subjt:  MASNSFIDKNVVFKRLKAKSENKI---------------------CFDCNAKREAVKIIRSRSFWGNDPVRVQGL

SwissProt top hitse value%identityAlignment
O82171 ADP-ribosylation factor GTPase-activating protein AGD103.0e-0574.19Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS +  DK  VFK+LKAKS+NKICFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

Q8H100 Probable ADP-ribosylation factor GTPase-activating protein AGD86.7e-0560Show/hide
Query:  ASNSFIDKNVVFKRLKAKSENKICFDCNAK
        ++++  DKN+VF++LK+KSENK+CFDC+AK
Subjt:  ASNSFIDKNVVFKRLKAKSENKICFDCNAK

Q9FIQ0 Probable ADP-ribosylation factor GTPase-activating protein AGD97.9e-0667.74Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MA+ +  DKNVVF++LK+KSENK+CFDC+AK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

Arabidopsis top hitse value%identityAlignment
AT2G35210.1 root and pollen arfgap2.1e-0674.19Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS +  DK  VFK+LKAKS+NKICFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

AT2G35210.2 root and pollen arfgap2.1e-0674.19Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MAS +  DK  VFK+LKAKS+NKICFDCNAK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK

AT4G17890.1 ARF-GAP domain 84.8e-0660Show/hide
Query:  ASNSFIDKNVVFKRLKAKSENKICFDCNAK
        ++++  DKN+VF++LK+KSENK+CFDC+AK
Subjt:  ASNSFIDKNVVFKRLKAKSENKICFDCNAK

AT4G17890.2 ARF-GAP domain 84.8e-0660Show/hide
Query:  ASNSFIDKNVVFKRLKAKSENKICFDCNAK
        ++++  DKN+VF++LK+KSENK+CFDC+AK
Subjt:  ASNSFIDKNVVFKRLKAKSENKICFDCNAK

AT5G46750.1 ARF-GAP domain 95.6e-0767.74Show/hide
Query:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK
        MA+ +  DKNVVF++LK+KSENK+CFDC+AK
Subjt:  MASNSFIDKNVVFKRLKAKSENKICFDCNAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTAATAGCTTCATCGACAAGAACGTAGTTTTCAAGAGGCTAAAGGCCAAGTCGGAGAACAAGATTTGTTTCGATTGTAATGCGAAGAGGGAGGCTGTTAAAAT
AATTAGGAGCCGGTCGTTTTGGGGCAACGACCCAGTGCGAGTACAAGGATTGAAATCAGATGAATCATGCACTCCTATACTTCTTGTCGTAAACAAGATATACTGTGCTC
TAGTCTTGGTATTG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTAATAGCTTCATCGACAAGAACGTAGTTTTCAAGAGGCTAAAGGCCAAGTCGGAGAACAAGATTTGTTTCGATTGTAATGCGAAGAGGGAGGCTGTTAAAAT
AATTAGGAGCCGGTCGTTTTGGGGCAACGACCCAGTGCGAGTACAAGGATTGAAATCAGATGAATCATGCACTCCTATACTTCTTGTCGTAAACAAGATATACTGTGCTC
TAGTCTTGGTATTG
Protein sequenceShow/hide protein sequence
MASNSFIDKNVVFKRLKAKSENKICFDCNAKREAVKIIRSRSFWGNDPVRVQGLKSDESCTPILLVVNKIYCALVLVL