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MELO3C028681 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028681
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr01:11856491..11857145
RNA-Seq ExpressionMELO3C028681
SyntenyMELO3C028681
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040709.1 hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa]2.1e-5177.54Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSF
        MS+YKQIGDACGGL+EVSKS MRK  LIEVRLKIR+ YT  I  Q+NITD+K NIF VQTISY EGRWFKERNANIHGSFTRQ  L+FNEFDFEA++YSF
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSF

Query:  MGFVATPLEKREKKPKKAHKNSQNSNERPTISNSPDST
        M F ATP +K EKKPKK  KNS+NSNERP+ISNS DST
Subjt:  MGFVATPLEKREKKPKKAHKNSQNSNERPTISNSPDST

KAA0046238.1 hypothetical protein E6C27_scaffold284G00350 [Cucumis melo var. makuwa]5.5e-2350Show/hide
Query:  SSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFM
        +S+ +IGDACGG ++V+  K  K DLIE+ +KI Y Y+ FIPT   + D +GN F++QTI+  E RW KER+  IHG+FTR+  + FNEF+ +AE+Y+F+
Subjt:  SSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFM

KAA0047508.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa]1.1e-4475.21Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSF
        M+SY+QIGDACGGL+EVSKS MRK DLIEVRLKIR+ YT FIP Q+NI DSKGNIF +QT+S+ E RWFKERNANIH  FTRQ  LEFNEFDFEAEKYSF
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSF

Query:  MGFVATPLEKREKKPKKAHKN
        MGFV TP +K++KK KK  K+
Subjt:  MGFVATPLEKREKKPKKAHKN

KAA0063733.1 hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa]3.3e-4480.34Show/hide
Query:  MRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLEKREKKPKKAHKN
        MRK DLIEVRLKIR+ Y  FIP Q+NI +SKGNIF VQT+S+ EGRWFKERNANIHGSFTRQ  LEFNEFDFEAEKYSFMGFVATP EK++KKPKK+ K+
Subjt:  MRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLEKREKKPKKAHKN

Query:  SQNSNERPTISNSPDST
        SQNSN+RPTISNS DST
Subjt:  SQNSNERPTISNSPDST

TYK07346.1 hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa]2.2e-4077.31Show/hide
Query:  MRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLE--KREKKPKKAH
        MRK DLIEVR KIR+ YT FIP Q+ ITDSKGNIF VQT+S+ EGR FKERNANIHGSFTRQ  LEFNEFDF+AEKY FMGFVATP E  K+EKK KK  
Subjt:  MRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLE--KREKKPKKAH

Query:  KNSQNSNERPTISNSPDST
        K+S+NSN+RPTISNSPDST
Subjt:  KNSQNSNERPTISNSPDST

TrEMBL top hitse value%identityAlignment
A0A5A7THF9 Uncharacterized protein1.0e-5177.54Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSF
        MS+YKQIGDACGGL+EVSKS MRK  LIEVRLKIR+ YT  I  Q+NITD+K NIF VQTISY EGRWFKERNANIHGSFTRQ  L+FNEFDFEA++YSF
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSF

Query:  MGFVATPLEKREKKPKKAHKNSQNSNERPTISNSPDST
        M F ATP +K EKKPKK  KNS+NSNERP+ISNS DST
Subjt:  MGFVATPLEKREKKPKKAHKNSQNSNERPTISNSPDST

A0A5A7V6K4 Uncharacterized protein1.6e-4480.34Show/hide
Query:  MRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLEKREKKPKKAHKN
        MRK DLIEVRLKIR+ Y  FIP Q+NI +SKGNIF VQT+S+ EGRWFKERNANIHGSFTRQ  LEFNEFDFEAEKYSFMGFVATP EK++KKPKK+ K+
Subjt:  MRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLEKREKKPKKAHKN

Query:  SQNSNERPTISNSPDST
        SQNSN+RPTISNS DST
Subjt:  SQNSNERPTISNSPDST

A0A5D3CAI5 Uncharacterized protein1.1e-4077.31Show/hide
Query:  MRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLE--KREKKPKKAH
        MRK DLIEVR KIR+ YT FIP Q+ ITDSKGNIF VQT+S+ EGR FKERNANIHGSFTRQ  LEFNEFDF+AEKY FMGFVATP E  K+EKK KK  
Subjt:  MRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLE--KREKKPKKAH

Query:  KNSQNSNERPTISNSPDST
        K+S+NSN+RPTISNSPDST
Subjt:  KNSQNSNERPTISNSPDST

A0A5D3D612 Uncharacterized protein2.7e-2350Show/hide
Query:  SSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFM
        +S+ +IGDACGG ++V+  K  K DLIE+ +KI Y Y+ FIPT   + D +GN F++QTI+  E RW KER+  IHG+FTR+  + FNEF+ +AE+Y+F+
Subjt:  SSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFM

A0A5D3DT94 Putative amidohydrolase ytcJ5.5e-4575.21Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSF
        M+SY+QIGDACGGL+EVSKS MRK DLIEVRLKIR+ YT FIP Q+NI DSKGNIF +QT+S+ E RWFKERNANIH  FTRQ  LEFNEFDFEAEKYSF
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSF

Query:  MGFVATPLEKREKKPKKAHKN
        MGFV TP +K++KK KK  K+
Subjt:  MGFVATPLEKREKKPKKAHKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCTACAAACAGATTGGGGATGCATGTGGAGGGTTAATAGAAGTCTCAAAATCAAAAATGAGAAAGATAGACCTTATTGAAGTTAGACTGAAGATCAGATACAA
GTATACATGGTTCATTCCAACTCAGGTTAACATCACAGACAGCAAAGGTAACATTTTCATGGTCCAAACTATTTCTTACCCAGAAGGAAGATGGTTCAAAGAAAGAAATG
CAAACATACATGGTTCTTTTACAAGACAAGTTGTCCTAGAATTCAATGAATTTGATTTCGAGGCTGAAAAATACTCTTTCATGGGATTTGTTGCTACACCGCTGGAGAAA
AGAGAAAAAAAGCCGAAGAAAGCTCATAAGAACAGCCAAAATAGTAACGAACGTCCGACAATTTCAAACTCACCAGACTCAACCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTGGACGAGCTTTAGAGGACTCCCATTGACAACCTGGAATATGAGCTCCTACAAACAGATTGGGGATGCATGTGGAGGGTTAATAGAAGTCTCAAAATCAAAA
ATGAGAAAGATAGACCTTATTGAAGTTAGACTGAAGATCAGATACAAGTATACATGGTTCATTCCAACTCAGGTTAACATCACAGACAGCAAAGGTAACATTTTCATGGT
CCAAACTATTTCTTACCCAGAAGGAAGATGGTTCAAAGAAAGAAATGCAAACATACATGGTTCTTTTACAAGACAAGTTGTCCTAGAATTCAATGAATTTGATTTCGAGG
CTGAAAAATACTCTTTCATGGGATTTGTTGCTACACCGCTGGAGAAAAGAGAAAAAAAGCCGAAGAAAGCTCATAAGAACAGCCAAAATAGTAACGAACGTCCGACAATT
TCAAACTCACCAGACTCAACCTTCTAGGCCATCATAATCTCTGACAACTCTGATGGTGGTAGGGGCAGTGATGGAAGACTCAAATCTGTCATTTCGGGTAAGATGGCCAA
AGGGAAGGGCATTATAGTCTTTAACGATAACCAAGAAAAGAAGGCAAAATTTCCAAAGAGGAAAGTCAGCTTCCCCTCTCCAAAAAACAAAACATTCTTCTACAA
Protein sequenceShow/hide protein sequence
MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRYKYTWFIPTQVNITDSKGNIFMVQTISYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAEKYSFMGFVATPLEK
REKKPKKAHKNSQNSNERPTISNSPDSTF