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MELO3C028706 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028706
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionChromatin-remodeling complex ATPase chain
Genome locationchr01:4727641..4730004
RNA-Seq ExpressionMELO3C028706
SyntenyMELO3C028706
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0031491 - nucleosome binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050572.1 putative chromatin-remodeling complex ATPase chain [Cucumis melo var. makuwa]3.2e-5094.17Show/hide
Query:  VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKVVFYSLSFSNDRFLDASQNLVNALLKL
        VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKVVFYSLSFSNDRFLDASQN       L
Subjt:  VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKVVFYSLSFSNDRFLDASQNLVNALLKL

Query:  VNALLKVKEELIVEAAGTKR
        VNALLKVKEELIVEAAGTKR
Subjt:  VNALLKVKEELIVEAAGTKR

KAB2625250.1 chromatin-remodeling complex ATPase chain [Pyrus ussuriensis x Pyrus communis]1.7e-2791.89Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKDELLQMVRFGAEMV SSKDSTITDEDID+II KGE TTAELDAKMKKFTED IKFKMD TAELYDFDDEK
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

RXH72050.1 hypothetical protein DVH24_025551 [Malus domestica]1.7e-2791.89Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKDELLQMVRFGAEMV SSKDSTITDEDID+II KGE TTAELDAKMKKFTED IKFKMD TAELYDFDDEK
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

TQE02711.1 hypothetical protein C1H46_011684 [Malus baccata]1.7e-2791.89Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKDELLQMVRFGAEMV SSKDSTITDEDID+II KGE TTAELDAKMKKFTED IKFKMD TAELYDFDDEK
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

TYJ20387.1 hypothetical protein E1A91_A09G261100v1 [Gossypium mustelinum]1.7e-2791.89Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKDELLQMVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEK
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

TrEMBL top hitse value%identityAlignment
A0A498HMU8 Uncharacterized protein8.2e-2891.89Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKDELLQMVRFGAEMV SSKDSTITDEDID+II KGE TTAELDAKMKKFTED IKFKMD TAELYDFDDEK
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

A0A498IDW0 Uncharacterized protein8.2e-2891.89Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKDELLQMVRFGAEMV SSKDSTITDEDID+II KGE TTAELDAKMKKFTED IKFKMD TAELYDFDDEK
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

A0A5D2PAR9 Uncharacterized protein8.2e-2891.89Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKDELLQMVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEK
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

A0A5D2PAT9 Uncharacterized protein8.2e-2891.89Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKDELLQMVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEK
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

A0A5D3D5H8 Putative chromatin-remodeling complex ATPase chain1.5e-5094.17Show/hide
Query:  VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKVVFYSLSFSNDRFLDASQNLVNALLKL
        VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKVVFYSLSFSNDRFLDASQN       L
Subjt:  VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKVVFYSLSFSNDRFLDASQNLVNALLKL

Query:  VNALLKVKEELIVEAAGTKR
        VNALLKVKEELIVEAAGTKR
Subjt:  VNALLKVKEELIVEAAGTKR

SwissProt top hitse value%identityAlignment
F4JY24 ISWI chromatin-remodeling complex ATPase CHR178.7e-2782.19Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE
        TVNKDELLQMVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE

O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 54.3e-1046.58Show/hide
Query:  VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIK-FKMDGTAELYDFDDE
        + KDE+LQM+R GA  V +SK+S ITDEDID I+ +G   TAE++ K+ K  E  ++ F MD  + +Y+F+ E
Subjt:  VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIK-FKMDGTAELYDFDDE

Q24368 Chromatin-remodeling complex ATPase chain Iswi4.3e-1047.44Show/hide
Query:  VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIK-FKMD-----GTAELYDFDDE
        +NKDE+L ++RFGA  V SSK++ ITDEDID I+ +GEA TAE  A +    E  ++ F MD     GT+ +Y F+ E
Subjt:  VNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIK-FKMD-----GTAELYDFDDE

Q7G8Y3 Probable chromatin-remodeling complex ATPase chain1.1e-2989.19Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK
        TVNKD+LLQMVRFGAEMV SSKDSTITDEDID+II KGE TTAELDAKMKKFTED IKFKMD TAELYDFDD+K
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEK

Q8RWY3 ISWI chromatin-remodeling complex ATPase CHR118.7e-2782.19Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE
        TVNKDELLQMVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE

Arabidopsis top hitse value%identityAlignment
AT3G06400.1 chromatin-remodeling protein 116.2e-2882.19Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE
        TVNKDELLQMVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE

AT3G06400.2 chromatin-remodeling protein 116.2e-2882.19Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE
        TVNKDELLQMVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE

AT3G06400.3 chromatin-remodeling protein 112.0e-2680Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGT--AELYDFDDE
        TVNKDELLQMVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +  A+ YDFDD+
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGT--AELYDFDDE

AT5G18620.1 chromatin remodeling factor176.2e-2882.19Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE
        TVNKDELLQMVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE

AT5G18620.2 chromatin remodeling factor176.2e-2882.19Show/hide
Query:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE
        TVNKDELLQMVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+
Subjt:  TVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGTGCACTTCATGCTCGTTGGCTATATGATGATAAGAAGGTATACTTTTATAGGGCTACTGTCAACAAGGATGAGCTACTTCAAATGGTGAGGTTTGGTGCTGA
GATGGTTTGCAGTTCCAAAGATAGCACCATCACAGACGAGGACATTGACAAAATCATTGTTAAGGGAGAAGCAACAACTGCAGAGCTTGATGCAAAGATGAAGAAATTTA
CAGAAGATGTCATTAAATTTAAAATGGATGGAACTGCTGAATTGTACGATTTTGATGATGAAAAGGTTGTGTTTTACTCACTTTCCTTTAGCAATGATCGCTTTCTTGAT
GCCTCTCAAAATCTTGTGAATGCATTGCTAAAGCTTGTGAATGCATTGCTAAAGGTTAAGGAAGAACTGATTGTAGAAGCTGCAGGAACGAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGTGCACTTCATGCTCGTTGGCTATATGATGATAAGAAGGTATACTTTTATAGGGCTACTGTCAACAAGGATGAGCTACTTCAAATGGTGAGGTTTGGTGCTGA
GATGGTTTGCAGTTCCAAAGATAGCACCATCACAGACGAGGACATTGACAAAATCATTGTTAAGGGAGAAGCAACAACTGCAGAGCTTGATGCAAAGATGAAGAAATTTA
CAGAAGATGTCATTAAATTTAAAATGGATGGAACTGCTGAATTGTACGATTTTGATGATGAAAAGGTTGTGTTTTACTCACTTTCCTTTAGCAATGATCGCTTTCTTGAT
GCCTCTCAAAATCTTGTGAATGCATTGCTAAAGCTTGTGAATGCATTGCTAAAGGTTAAGGAAGAACTGATTGTAGAAGCTGCAGGAACGAAAAGGTAATATGATCTTAT
AGATAAGATCA
Protein sequenceShow/hide protein sequence
MLGALHARWLYDDKKVYFYRATVNKDELLQMVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKVVFYSLSFSNDRFLD
ASQNLVNALLKLVNALLKVKEELIVEAAGTKR