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MELO3C028745 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028745
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr01:16633313..16634292
RNA-Seq ExpressionMELO3C028745
SyntenyMELO3C028745
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.6e-3975.45Show/hide
Query:  NLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDML
        +LTPTIEEY+ALISLP+DRGNK YI DRKLT++ SLSKFMGDIHASE+KKQ+K KEGRNCIPINYLINLA GCLS KKGLSLIALCIYGTIIF  +K  +
Subjt:  NLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDML

Query:  KKRLLRFFLG
        ++ +++ F+G
Subjt:  KKRLLRFFLG

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.7e-6680.89Show/hide
Query:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK
        MPE R +F KAYGSIGDLLYTTINTSTLQALS+FWDP+LKCFTFNT +LTPTIEEYQALISLPVDRGNK YI  RKLTLQ SLSKFMGDIHASE+KKQMK
Subjt:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK

Query:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG
        TKEGRNCIPINYLINLA GCL GKKGLSLIALCIYGT+IF  +K  +++ +++ F+G
Subjt:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.8e-6580.25Show/hide
Query:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK
        MPE R EFTKAYGSI DLLYTTINTSTLQALS+FWDP+LKCFTFNT +LTPTIEEYQALISLPVDRGN  YI DRKLTLQ SLSKFMGDIHASE+KKQMK
Subjt:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK

Query:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG
        TKEGRNCIPINYLINLA GCL  K GLSLIALCIYGT+IF  +K  +++ +++ F+G
Subjt:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]2.0e-6681.53Show/hide
Query:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK
        MPE R EFTKAYGSIGDLLYTTINTSTLQALS+FWDP+LK FTFNT +LTPTIEEYQALISLPVDRGNK YI DRKLTLQ SLSKFMGDIHASE+KK MK
Subjt:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK

Query:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG
        TKEGRNCIPINYLINLA GCL GKKGLSLIALCIYGT+IF  +K  +++ +++ F+G
Subjt:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.6e-3975.45Show/hide
Query:  NLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDML
        +LTPTIEEY+ALISLP+DRGNK YI DRKLT++ SLSKFMGDIHASE+KKQ+K KEGRNCIPINYLINLA GCLS KKGLSLIALCIYGTIIF  +K  +
Subjt:  NLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDML

Query:  KKRLLRFFLG
        ++ +++ F+G
Subjt:  KKRLLRFFLG

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like7.9e-4075.45Show/hide
Query:  NLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDML
        +LTPTIEEY+ALISLP+DRGNK YI DRKLT++ SLSKFMGDIHASE+KKQ+K KEGRNCIPINYLINLA GCLS KKGLSLIALCIYGTIIF  +K  +
Subjt:  NLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDML

Query:  KKRLLRFFLG
        ++ +++ F+G
Subjt:  KKRLLRFFLG

A0A5A7SUT0 Reverse transcriptase1.3e-6680.89Show/hide
Query:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK
        MPE R +F KAYGSIGDLLYTTINTSTLQALS+FWDP+LKCFTFNT +LTPTIEEYQALISLPVDRGNK YI  RKLTLQ SLSKFMGDIHASE+KKQMK
Subjt:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK

Query:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG
        TKEGRNCIPINYLINLA GCL GKKGLSLIALCIYGT+IF  +K  +++ +++ F+G
Subjt:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG

A0A5A7TXA1 Glial fibrillary acidic protein-like1.9e-6580.25Show/hide
Query:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK
        MPE R EFTKAYGSI DLLYTTINTSTLQALS+FWDP+LKCFTFNT +LTPTIEEYQALISLPVDRGN  YI DRKLTLQ SLSKFMGDIHASE+KKQMK
Subjt:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK

Query:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG
        TKEGRNCIPINYLINLA GCL  K GLSLIALCIYGT+IF  +K  +++ +++ F+G
Subjt:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG

A0A5A7VHI3 Uncharacterized protein9.9e-6781.53Show/hide
Query:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK
        MPE R EFTKAYGSIGDLLYTTINTSTLQALS+FWDP+LK FTFNT +LTPTIEEYQALISLPVDRGNK YI DRKLTLQ SLSKFMGDIHASE+KK MK
Subjt:  MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMK

Query:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG
        TKEGRNCIPINYLINLA GCL GKKGLSLIALCIYGT+IF  +K  +++ +++ F+G
Subjt:  TKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG

A0A5D3D0S2 Glial fibrillary acidic protein-like7.9e-4075.45Show/hide
Query:  NLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDML
        +LTPTIEEY+ALISLP+DRGNK YI DRKLT++ SLSKFMGDIHASE+KKQ+K KEGRNCIPINYLINLA GCLS KKGLSLIALCIYGTIIF  +K  +
Subjt:  NLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGRNCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDML

Query:  KKRLLRFFLG
        ++ +++ F+G
Subjt:  KKRLLRFFLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGAGCATAGAGTAGAGTTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCAAATTTCTGG
GACCCTATGTTGAAGTGTTTCACGTTCAACACGGTCAACTTAACTCCTACTATAGAAGAATATCAAGCACTTATTAGCCTACCAGTTGACAGAGGGAATAAGCCT
TATATCAATGATCGAAAGTTGACTTTACAAGGGTCACTATCAAAGTTTATGGGTGACATTCATGCATCTGAGATAAAGAAACAGATGAAGACAAAAGAAGGTAGG
AATTGTATTCCCATCAATTATCTCATCAATCTTGCGCATGGTTGTTTATCAGGGAAGAAGGGTTTGTCTCTCATCGCATTATGTATCTATGGAACAATTATTTTC
CTAGAATTAAAGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTCTTGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAATACTTACGCATTTGAGGTCGTTGCCCAATTGATTCCTAATGAAGACTCGTGAGAGAATGTATCTCAGTGGTGGGAACATTTTCAACTAGAGTCAGGG
GTGAGTTGGCTAAAGAAATTAGAAGTTCCACTTCCAAAGACTTGTCAGTTGGGATTCATCAACAATAACCTGGAAGAATTAAAAAGCTTATGGGAGAGCTTAATG
CCAGAGCATAGAGTAGAGTTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCAAATTTCTGGGAC
CCTATGTTGAAGTGTTTCACGTTCAACACGGTCAACTTAACTCCTACTATAGAAGAATATCAAGCACTTATTAGCCTACCAGTTGACAGAGGGAATAAGCCTTAT
ATCAATGATCGAAAGTTGACTTTACAAGGGTCACTATCAAAGTTTATGGGTGACATTCATGCATCTGAGATAAAGAAACAGATGAAGACAAAAGAAGGTAGGAAT
TGTATTCCCATCAATTATCTCATCAATCTTGCGCATGGTTGTTTATCAGGGAAGAAGGGTTTGTCTCTCATCGCATTATGTATCTATGGAACAATTATTTTCCTA
GAATTAAAGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTCTTGGGATAGAACGAGGGGTAAACCCTGTTATCCCAATCATGGCAGGGACTTTCAAATCACTAA
ATCATTGTCGAATCCAAGATAAAGGAAAATTCTTCAACTGTGCTCCTATGCTCTTCATTTGGATTTCCAGTCAACTAAGGTATCCTAATAATTTTGGATATCCTC
AAATAGAATTCAGCAGTCCGTGGAATAATACAAGAAACACTATTAGAGAATTCAATAGTGCACACTAGGATCCAAAGGATCCATAATTTGCGGTTTGGATACAGT
TTTTCAGTCATTTAACGACAGTAGAAGCAATTTGG
Protein sequenceShow/hide protein sequence
MPEHRVEFTKAYGSIGDLLYTTINTSTLQALSNFWDPMLKCFTFNTVNLTPTIEEYQALISLPVDRGNKPYINDRKLTLQGSLSKFMGDIHASEIKKQMKTKEGR
NCIPINYLINLAHGCLSGKKGLSLIALCIYGTIIFLELKDMLKKRLLRFFLG