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MELO3C028752 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028752
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionHistone H3
Genome locationchr01:5681740..5684558
RNA-Seq ExpressionMELO3C028752
SyntenyMELO3C028752
Gene Ontology termsGO:0006996 - organelle organization (biological process)
GO:0010597 - green leaf volatile biosynthetic process (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000164 - Histone H3/CENP-A
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462109.1 PREDICTED: histone H3-like centromeric protein HTR12, partial [Cucumis melo]1.1e-2392.31Show/hide
Query:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        P  + K+KIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
Subjt:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

XP_011659152.1 histone H3-1 isoform X1 [Cucumis sativus]1.5e-2575Show/hide
Query:  NAASMPHLPGEGKLQTISQIPSPPSRT-KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        ++ + P  P  G+ Q + Q  +  SRT KKK RFRPGTVAL+EIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
Subjt:  NAASMPHLPGEGKLQTISQIPSPPSRT-KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

XP_011659153.1 histone H3-like centromeric protein HTR12 isoform X2 [Cucumis sativus]1.5e-2575Show/hide
Query:  NAASMPHLPGEGKLQTISQIPSPPSRT-KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        ++ + P  P  G+ Q + Q  +  SRT KKK RFRPGTVAL+EIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
Subjt:  NAASMPHLPGEGKLQTISQIPSPPSRT-KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

XP_022156549.1 histone H3-like centromeric protein HTR12 [Momordica charantia]9.1e-2373.49Show/hide
Query:  PHLPGEGKLQTISQIPSPPSRTK-KKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        P  P  G+ Q + Q  SPP+RT  KK RFRPGTVALREIR  QK+WNLLIPAS FIRAVKEVS QLAP+ITRWQAEAL+ALQE
Subjt:  PHLPGEGKLQTISQIPSPPSRTK-KKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

XP_038896752.1 histone H3-like centromeric protein HTR12 [Benincasa hispida]4.4e-2575Show/hide
Query:  NAASMPHLPGEGKLQTISQIPSPPSR-TKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        ++ + P  P  G+ Q + Q  S P R TKKK RFRPGTVALREIR+LQKSWNLLIPASCFIRAVKEVS QLAPQITRWQAEALVALQE
Subjt:  NAASMPHLPGEGKLQTISQIPSPPSR-TKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

TrEMBL top hitse value%identityAlignment
A0A0A0K4F4 Histone H3.27.2e-2675Show/hide
Query:  NAASMPHLPGEGKLQTISQIPSPPSRT-KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        ++ + P  P  G+ Q + Q  +  SRT KKK RFRPGTVAL+EIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
Subjt:  NAASMPHLPGEGKLQTISQIPSPPSRT-KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

A0A1S3CG56 Histone H3.25.2e-2492.31Show/hide
Query:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        P  + K+KIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
Subjt:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

A0A6J1DTT5 Histone H3.24.4e-2373.49Show/hide
Query:  PHLPGEGKLQTISQIPSPPSRTK-KKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        P  P  G+ Q + Q  SPP+RT  KK RFRPGTVALREIR  QK+WNLLIPAS FIRAVKEVS QLAP+ITRWQAEAL+ALQE
Subjt:  PHLPGEGKLQTISQIPSPPSRTK-KKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

A0A6J1H6R9 Histone H3.27.5e-2371.59Show/hide
Query:  NAASMPHLPGEGKLQTISQIPSPPSRTK-KKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        ++++ P  P  G+ Q+  Q  SP SRT  KK RFRPGTVALREIR LQKSWNLLIPAS FIRAVKEVS QLAPQ+TRWQAEAL+ALQE
Subjt:  NAASMPHLPGEGKLQTISQIPSPPSRTK-KKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

A0A6J1KTZ4 Histone H3.27.5e-2371.59Show/hide
Query:  NAASMPHLPGEGKLQTISQIPSPPSRTK-KKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        ++++ P  P  G+ Q+  Q  SP SRT  KK RFRPGTVALREIR LQKSWNLLIPAS FIRAVKEVS QLAPQ+TRWQAEAL+ALQE
Subjt:  NAASMPHLPGEGKLQTISQIPSPPSRTK-KKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

SwissProt top hitse value%identityAlignment
P81195 Histone H3-1 (Fragment)3.3e-0753.33Show/hide
Query:  KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        KK  RFRPGTVALREIR  QKS  LLI    F R V+E++ +    + R+Q++A++ALQE
Subjt:  KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

P81199 Histone H3-5 (Fragment)1.9e-0752.38Show/hide
Query:  SRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        S  KK  RFRPGTVALREIR  QKS  LLI    F R V+E++ +    + R+Q++A++ALQE
Subjt:  SRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

Q55BP0 Histone H3.3 type c6.6e-0850Show/hide
Query:  LQTISQIPSPPSR--TKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        L + S  PS P     KK  RFRPGTVALREIR  QKS +LLI    F R V+E++ +    + R+QA A+ ALQE
Subjt:  LQTISQIPSPPSR--TKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

Q7RXR3 Histone H3-like centromeric protein hH3v1.8e-1044.44Show/hide
Query:  PGEGKLQTISQIPSPPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAP--QITRWQAEALVALQE
        PG  K +  S  P  P    KK R+RPGT+AL+EIRN Q++ +LL+    F R V+E++ Q  P  +  RWQ++A++ALQE
Subjt:  PGEGKLQTISQIPSPPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAP--QITRWQAEALVALQE

Q8RVQ9 Histone H3-like centromeric protein HTR121.6e-1463.64Show/hide
Query:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLA-PQITRWQAEALVALQE
        P    KK  R+RPGTVAL+EIR+ QK  NLLIPA+ FIR V+ +++ LA PQI RW AEALVALQE
Subjt:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLA-PQITRWQAEALVALQE

Arabidopsis top hitse value%identityAlignment
AT1G01370.1 Histone superfamily protein1.1e-1563.64Show/hide
Query:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLA-PQITRWQAEALVALQE
        P    KK  R+RPGTVAL+EIR+ QK  NLLIPA+ FIR V+ +++ LA PQI RW AEALVALQE
Subjt:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLA-PQITRWQAEALVALQE

AT1G01370.2 Histone superfamily protein1.1e-1563.64Show/hide
Query:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLA-PQITRWQAEALVALQE
        P    KK  R+RPGTVAL+EIR+ QK  NLLIPA+ FIR V+ +++ LA PQI RW AEALVALQE
Subjt:  PPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLA-PQITRWQAEALVALQE

AT1G09200.1 Histone superfamily protein8.8e-0853.33Show/hide
Query:  KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        KK  RFRPGTVALREIR  QKS  LLI    F R V+E++      + R+Q+ A+ ALQE
Subjt:  KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

AT3G27360.1 Histone superfamily protein8.8e-0853.33Show/hide
Query:  KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        KK  RFRPGTVALREIR  QKS  LLI    F R V+E++      + R+Q+ A+ ALQE
Subjt:  KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE

AT5G10390.1 Histone superfamily protein8.8e-0853.33Show/hide
Query:  KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE
        KK  RFRPGTVALREIR  QKS  LLI    F R V+E++      + R+Q+ A+ ALQE
Subjt:  KKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCTGTAACTCTCCTTTGCTTCGCTGCTTGCTTTAACCTTCACAATGCGGCCTCAATGCCTCACTTACCTGGGGAAGGGAAACTTCAAACCATAAGCCAAATTCC
TAGCCCACCATCAAGAACAAAGAAAAAAATACGCTTCAGACCAGGAACGGTGGCATTGAGAGAAATTCGGAATCTCCAGAAATCATGGAATCTGCTAATTCCAGCTAGCT
GTTTCATCCGAGCAGTGAAAGAAGTAAGCAACCAGTTGGCTCCACAGATTACGAGATGGCAAGCTGAAGCTTTAGTAGCTCTTCAGGAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCTGTAACTCTCCTTTGCTTCGCTGCTTGCTTTAACCTTCACAATGCGGCCTCAATGCCTCACTTACCTGGGGAAGGGAAACTTCAAACCATAAGCCAAATTCC
TAGCCCACCATCAAGAACAAAGAAAAAAATACGCTTCAGACCAGGAACGGTGGCATTGAGAGAAATTCGGAATCTCCAGAAATCATGGAATCTGCTAATTCCAGCTAGCT
GTTTCATCCGAGCAGTGAAAGAAGTAAGCAACCAGTTGGCTCCACAGATTACGAGATGGCAAGCTGAAGCTTTAGTAGCTCTTCAGGAAGT
Protein sequenceShow/hide protein sequence
MPAVTLLCFAACFNLHNAASMPHLPGEGKLQTISQIPSPPSRTKKKIRFRPGTVALREIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE