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MELO3C028800 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C028800
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr04:20847533..20847828
RNA-Seq ExpressionMELO3C028800
SyntenyMELO3C028800
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045600.1 hypothetical protein E6C27_scaffold243G001060 [Cucumis melo var. makuwa]1.1e-0478.12Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFD
        MVL+P EVGL+I+GR WSFDVS N LFLAAFD
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFD
KAA0047526.1 small ribosomal subunit protein S13 [Cucumis melo var. makuwa]1.0e-0577.14Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFDGVR
        +VL+P EVGLAIRGR WSFDVS+N LFLAAF+ VR
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFDGVR
KAA0053193.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.9e-0583.87Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAF
        MVL+PSEVGL I GR WSFDVS NGLFLAAF
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAF
TYK00149.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.9e-0583.87Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAF
        MVL+PSEVGL I GR WSFDVS NGLFLAAF
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAF
TYK30860.1 reactive Intermediate Deaminase A [Cucumis melo var. makuwa]7.3e-0478.12Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFD
        MVL+  EVGLAIRGR WSFDV+ N LFLAAFD
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFD
TrEMBL top hitse value%identityAlignment
A0A5A7TR50 Uncharacterized protein5.5e-0578.12Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFD
        MVL+P EVGL+I+GR WSFDVS N LFLAAFD
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFD
A0A5A7UB76 Ty3-gypsy retrotransposon protein1.9e-0583.87Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAF
        MVL+PSEVGL I GR WSFDVS NGLFLAAF
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAF
A0A5D3BPV7 Ty3-gypsy retrotransposon protein1.9e-0583.87Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAF
        MVL+PSEVGL I GR WSFDVS NGLFLAAF
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAF
A0A5D3DT03 Small ribosomal subunit protein S135.0e-0677.14Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFDGVR
        +VL+P EVGLAIRGR WSFDVS+N LFLAAF+ VR
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFDGVR
A0A5D3E5H8 Reactive Intermediate Deaminase A3.6e-0478.12Show/hide
Query:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFD
        MVL+  EVGLAIRGR WSFDV+ N LFLAAFD
Subjt:  MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTGGATCCATCAGAGGTTGGTTTAGCCATCAGAGGAAGATGTTGGAGTTTCGACGTTAGCGACAACGGGCTTTTTTTAGCAGCGTTTGATGGCGTCCGATGTTA
G
mRNA sequenceShow/hide mRNA sequence
AAAGGAAACATGAAAAATAGGAAAAGGGGGCAGCCGCAAGTTGAAAAAGCACAGTAGAGAAAGTTTTTGTAGCAAAAAAGATTGATAGAGAAGAGTATGGTGTAACGGTT
TCCGGCGTTCGTTTCAACAGCTTCACAACGTGTTTAACGGCTGGTTTAACCATGGTTTTGGATCCATCAGAGGTTGGTTTAGCCATCAGAGGAAGATGTTGGAGTTTCGA
CGTTAGCGACAACGGGCTTTTTTTAGCAGCGTTTGATGGCGTCCGATGTTAGTCGTGGGTTTGCGGCGGGTTCTAA
Protein sequenceShow/hide protein sequence
MVLDPSEVGLAIRGRCWSFDVSDNGLFLAAFDGVRC