CuGenDBv2

Gene ID	MELO3C029538
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Protein Ycf2
Genome location	chr02:23847451..23848793
RNA-Seq Expression	MELO3C029538
Synteny	MELO3C029538
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

QFV19799.1 hypothetical chloroplast RF21 [Macrosolen bibracteolatus]

4.6e-19

81.36

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Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNEEGSYLY WYFEL TSMK+L ILLY+LSCS GS+ QDLWFLP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

QFV19867.1 hypothetical chloroplast RF21 [Macrosolen cochinchinensis]

4.6e-19

81.36

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Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNEEGSYLY WYFEL TSMK+L ILLY+LSCS GS+ QDLWFLP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

QFV19935.1 hypothetical chloroplast RF21 [Macrosolen tricolor]

4.6e-19

81.36

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Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNEEGSYLY WYFEL TSMK+L ILLY+LSCS GS+ QDLWFLP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

YP_009346523.1 ycf2 [Cucumis x hytivus]

1.6e-19

81.36

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Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE GSYLYNWYF+LETSMK+LTILLY+LSCS GS++QDLW LP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

YP_009708688.1 Ycf2 protein [Elytranthe albida]

4.6e-19

81.36

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Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNEEGSYLY WYFEL TSMK+L ILLY+LSCS GS+ QDLWFLP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

TrEMBL top hits

e value

%identity

Alignment

A0A1P8C7T9 Protein Ycf2

7.6e-20

81.36

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE GSYLYNWYF+LETSMK+LTILLY+LSCS GS++QDLW LP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

A0A4Y5RCZ8 Protein Ycf2

7.6e-20

81.36

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Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE GSYLYNWYF+LETSMK+LTILLY+LSCS GS++QDLW LP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

A0A5P9S1D6 Protein Ycf2

2.2e-19

81.36

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Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNEEGSYLY WYFEL TSMK+L ILLY+LSCS GS+ QDLWFLP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

A0A5P9S1Q4 Protein Ycf2

2.2e-19

81.36

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Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNEEGSYLY WYFEL TSMK+L ILLY+LSCS GS+ QDLWFLP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

A0A5P9S2A9 Protein Ycf2

2.2e-19

81.36

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNEEGSYLY WYFEL TSMK+L ILLY+LSCS GS+ QDLWFLP PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

SwissProt top hits

e value

%identity

Alignment

A4QJF8 Protein Ycf2

1.9e-20

77.97

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

A4QJP2 Protein Ycf2

1.9e-20

77.97

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

A4QKX4 Protein Ycf2 A

1.9e-20

77.97

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

A4QKZ7 Protein Ycf2 B

1.9e-20

77.97

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

Q2QD30 Protein Ycf2

1.3e-21

79.66

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE GSYLYNWYFELETSMK+LTILLY+L+CS GS++QDLW L  PDEKN ITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

1.4e-21

77.97

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

1.4e-21

77.97

Show/hide

Query:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS
        M KKSCNE  SYLY WYFEL TSMK+ TILLY+LSCS GS+ QDLW LP PDEKNRITS
Subjt:  MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

Sequences

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CDS sequence

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ATGATGAAGAAATCATGTAACGAAGAGGGTTCTTATTTGTACAATTGGTACTTCGAACTTGAAACTAGCATGAAGGAATTAACGATACTTCTTTATGTTTTGAGTTGTTC
TATCGGATCGATCATTCAAGACCTTTGGTTTCTACCCGAACCCGATGAAAAAAATAGGATCACTTCTTAG

mRNA sequence

Show/hide mRNA sequence

ATGGGTTCCAATGTACGTGATATTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAAAAATCAATTATAGACACTAATATAATTAGATCTGCTCTTCA
TTGACAAACTTGGGATTTTCTATCCCGTATAGGAAGGGCTGTTGCGCAAAATGTACTTCTAAGTAATTGCTCCATAGATCCTATATCTATCTATATGATGAAGAAATCAT
GTAACGAAGAGGGTTCTTATTTGTACAATTGGTACTTCGAACTTGAAACTAGCATGAAGGAATTAACGATACTTCTTTATGTTTTGAGTTGTTCTATCGGATCGATCATT
CAAGACCTTTGGTTTCTACCCGAACCCGATGAAAAAAATAGGATCACTTCTTAGGGACTTGTTGAGAATAATTATGATCTGGTTCATGGCCTATTAGAAGTAGAAGGCGC
TTTGTTGGGATCCTCACAGATAGAAAAAGATTGCAGTCGATTTGATAAGGATCAAGTGACATTGCTTCTTCGACTTGGACTTATGAATCCCTTAGATATGATACAAAATG
GATATTGTTCTATCATTGGCCAGAGATTTCTTTATCAACAATACAAATTGGAGTTTGAAGAAGGGGAATGAGTCCTCAACCTGCAACAGATAGAGGAGAATTTATTTAAT
CACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTAATTGTATCGAAAGGCTCAATGAATTGGGATTTCCCTATTGGGCTAGGTCATTTCGGGGCAA
GCAGATCATTTATGATGAAGATGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCATGCAGTACCAGACACGAGATAGATCTTTCAAAGAACAAGGCT
TTTTTTGAATAAGCCAATTCATTTATGATCTTGTAGATCCACTCTTTTTCCTATTCAAAGATCATCCTTTTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAA
GAGATATCAAAGAGGTTGCTTCCTTCCCAAATATATTGTTCTATATCTCTACATAAACCCTTGTTTATCGAGAAAACACAAGAAAAGTACTTCTGATTGTTGATTTATCG
CCAGAGATGGCTCAGAACCAATAGTTCATTATCTAATGGATTTTTCTGTTCTAATACTCCATCTGAGAGTTATCAGTATTTATCAAATATGTTCCTATATAACGAAACAC
TATTAGATCAAATGACAAAGACATTGTTGAGAAAAAGATGGCTTTTCCCGAATGAAATGGTTGTTTTGCTATCTGTTACAATAACGAATCATTG

Protein sequence

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MMKKSCNEEGSYLYNWYFELETSMKELTILLYVLSCSIGSIIQDLWFLPEPDEKNRITS

MELO3C029538 (gene) of Melon (DHL92) v4 genome