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MELO3C029568 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C029568
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr02:10799302..10806781
RNA-Seq ExpressionMELO3C029568
SyntenyMELO3C029568
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038060.1 hypothetical protein E6C27_scaffold36G002660 [Cucumis melo var. makuwa]1.5e-2074.67Show/hide
Query:  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVTCHMATQFCFRVY
        FATDQY LGAPSGRRRPD VPTGAHVARV ERA            SEGK RGKLASD+EG+VTCHM TQFCFRVY
Subjt:  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVTCHMATQFCFRVY

KAA0038061.1 uncharacterized protein E6C27_scaffold36G002670 [Cucumis melo var. makuwa]5.8e-2075Show/hide
Query:  DQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVTCHMATQFCFRVY
        DQYVLGAPSGRRRPD VPTGAHVARV ERA            SEGKGRGKLASD+EG+VTCH+ TQFCFRVY
Subjt:  DQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVTCHMATQFCFRVY

KAA0043073.1 hypothetical protein E6C27_scaffold158G00090 [Cucumis melo var. makuwa]9.6e-2376Show/hide
Query:  QFATDQYVLGAPSGRRRPDSVPTGAHVARVWERAS-----------EGKGRGKLASDREGTVTCHMATQFCFRVY
        +FATDQYVLGAPSGRRRPDSVPTGAHVA VWERAS            GKGRGKLAS+REG+VTCH+ TQFCFRVY
Subjt:  QFATDQYVLGAPSGRRRPDSVPTGAHVARVWERAS-----------EGKGRGKLASDREGTVTCHMATQFCFRVY

KAA0051492.1 uncharacterized protein E6C27_scaffold174G00110 [Cucumis melo var. makuwa]1.1e-2348.95Show/hide
Query:  DGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV-------------FQFA------------------------------TDQYVLGAPSGRRRPDSVPTG
        +GKGRGKLASD+EGSVTCHMGTQFCFRVY+S+             F+F                                 Q+VLGA SG RRPD    G
Subjt:  DGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV-------------FQFA------------------------------TDQYVLGAPSGRRRPDSVPTG

Query:  AHVAR---VWERASEGKGRGKLASDREGTVTCHMATQFCFRVY
        +         +R  EGKGRGKLASDREG+VTCHM TQFCFRVY
Subjt:  AHVAR---VWERASEGKGRGKLASDREGTVTCHMATQFCFRVY

KAA0058412.1 hypothetical protein E6C27_scaffold409G001240 [Cucumis melo var. makuwa]6.0e-2593.65Show/hide
Query:  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERASEGKGRGKLASDREGTVTCHMATQFCFRVY
        FATDQYVLGAPSGRRRPDSVPTG HVARV ERASEGKGRGKLASDREG VTCHM TQFCFRVY
Subjt:  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERASEGKGRGKLASDREGTVTCHMATQFCFRVY

TrEMBL top hitse value%identityAlignment
A0A5A7T3Y4 Uncharacterized protein7.4e-2174.67Show/hide
Query:  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVTCHMATQFCFRVY
        FATDQY LGAPSGRRRPD VPTGAHVARV ERA            SEGK RGKLASD+EG+VTCHM TQFCFRVY
Subjt:  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVTCHMATQFCFRVY

A0A5A7T8U3 Uncharacterized protein2.8e-2075Show/hide
Query:  DQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVTCHMATQFCFRVY
        DQYVLGAPSGRRRPD VPTGAHVARV ERA            SEGKGRGKLASD+EG+VTCH+ TQFCFRVY
Subjt:  DQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVTCHMATQFCFRVY

A0A5A7TI99 Uncharacterized protein4.7e-2376Show/hide
Query:  QFATDQYVLGAPSGRRRPDSVPTGAHVARVWERAS-----------EGKGRGKLASDREGTVTCHMATQFCFRVY
        +FATDQYVLGAPSGRRRPDSVPTGAHVA VWERAS            GKGRGKLAS+REG+VTCH+ TQFCFRVY
Subjt:  QFATDQYVLGAPSGRRRPDSVPTGAHVARVWERAS-----------EGKGRGKLASDREGTVTCHMATQFCFRVY

A0A5A7U6W1 Uncharacterized protein5.5e-2448.95Show/hide
Query:  DGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV-------------FQFA------------------------------TDQYVLGAPSGRRRPDSVPTG
        +GKGRGKLASD+EGSVTCHMGTQFCFRVY+S+             F+F                                 Q+VLGA SG RRPD    G
Subjt:  DGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV-------------FQFA------------------------------TDQYVLGAPSGRRRPDSVPTG

Query:  AHVAR---VWERASEGKGRGKLASDREGTVTCHMATQFCFRVY
        +         +R  EGKGRGKLASDREG+VTCHM TQFCFRVY
Subjt:  AHVAR---VWERASEGKGRGKLASDREGTVTCHMATQFCFRVY

A0A5A7URB2 Uncharacterized protein2.9e-2593.65Show/hide
Query:  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERASEGKGRGKLASDREGTVTCHMATQFCFRVY
        FATDQYVLGAPSGRRRPDSVPTG HVARV ERASEGKGRGKLASDREG VTCHM TQFCFRVY
Subjt:  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERASEGKGRGKLASDREGTVTCHMATQFCFRVY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAATAAACGTCAGCCGGCCACAAAGACTCCGACGGCGACCCACAACACTTTGACTCCAACCCATTGCAATTCACAGTACTTTGACTCCAACGGCGACCCACGTAT
CGAAAACGTTGTGGGATCCACGTTTCTATTTGAAGCCAAGTTCATCCAAGGCGACGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATA
TGGGGACTCAGTTTTGCTTTCGCGTCTATGTTTCAGTGTTTCAGTTCGCTACAGACCAGTATGTCCTAGGTGCTCCCTCGGGACGCCGAAGACCAGATTCTGTTCCTACG
GGAGCGCATGTTGCACGTGTTTGGGAACGTGCCAGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAGAGAAGGGACCGTGACATGCCATATGGCGACTCAGTTTTG
CTTCCGCGTCTATAACCCGAAGGATCGGGATTTACAAGAGGCCTTAGTGAAAGCACTTGGCCTAGGACAAGGTGGGACCAAACACCAATCAGGAAGTATCAACTCTTCCC
ATATAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAATAAACGTCAGCCGGCCACAAAGACTCCGACGGCGACCCACAACACTTTGACTCCAACCCATTGCAATTCACAGTACTTTGACTCCAACGGCGACCCACGTAT
CGAAAACGTTGTGGGATCCACGTTTCTATTTGAAGCCAAGTTCATCCAAGGCGACGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATA
TGGGGACTCAGTTTTGCTTTCGCGTCTATGTTTCAGTGTTTCAGTTCGCTACAGACCAGTATGTCCTAGGTGCTCCCTCGGGACGCCGAAGACCAGATTCTGTTCCTACG
GGAGCGCATGTTGCACGTGTTTGGGAACGTGCCAGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAGAGAAGGGACCGTGACATGCCATATGGCGACTCAGTTTTG
CTTCCGCGTCTATAACCCGAAGGATCGGGATTTACAAGAGGCCTTAGTGAAAGCACTTGGCCTAGGACAAGGTGGGACCAAACACCAATCAGGAAGTATCAACTCTTCCC
ATATAATCTAA
Protein sequenceShow/hide protein sequence
MQNKRQPATKTPTATHNTLTPTHCNSQYFDSNGDPRIENVVGSTFLFEAKFIQGDGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVFQFATDQYVLGAPSGRRRPDSVPT
GAHVARVWERASEGKGRGKLASDREGTVTCHMATQFCFRVYNPKDRDLQEALVKALGLGQGGTKHQSGSINSSHII