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MELO3C030030 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030030
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr03:19309118..19310523
RNA-Seq ExpressionMELO3C030030
SyntenyMELO3C030030
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.2e-1064.41Show/hide
Query:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
        GIAYS LLVLRQSWSKQFAP++CGLE W+FSYES++AN K           K MK LRH
Subjt:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]1.6e-1064.41Show/hide
Query:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
        GIAYS LLVLRQSWSKQFAP++CGLE W+FSYES++AN K           K MK LRH
Subjt:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
KGN51408.1 hypothetical protein Csa_007736 [Cucumis sativus]9.8e-0574.29Show/hide
Query:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESD
        GIAYS LLVL Q+WSKQFA +I GLE W FSYE+D
Subjt:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESD
TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.2e-1064.41Show/hide
Query:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
        GIAYS LLVLRQSWSKQFAP++CGLE W+FSYES++AN K           K MK LRH
Subjt:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
TrEMBL top hitse value%identityAlignment
A0A0A0KP72 Uncharacterized protein4.7e-0574.29Show/hide
Query:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESD
        GIAYS LLVL Q+WSKQFA +I GLE W FSYE+D
Subjt:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESD
A0A5A7SNY0 Glial fibrillary acidic protein-like5.8e-1164.41Show/hide
Query:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
        GIAYS LLVLRQSWSKQFAP++CGLE W+FSYES++AN K           K MK LRH
Subjt:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
A0A5A7SUT0 Reverse transcriptase7.5e-1164.41Show/hide
Query:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
        GIAYS LLVLRQSWSKQFAP++CGLE W+FSYES++AN K           K MK LRH
Subjt:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
A0A5D3D0S2 Glial fibrillary acidic protein-like5.8e-1164.41Show/hide
Query:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
        GIAYS LLVLRQSWSKQFAP++CGLE W+FSYES++AN K           K MK LRH
Subjt:  GIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKK-----------KFMKQLRH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGAATTGCTTATTCTCTTCTTTTGGTACTACGTCAATCATGGTCAAAACAATTCGCGCCAATTATATGTGGGCTAGAGGTTTGGAAATTCTCATATGAG
TCAGACGTGGCAAATAAAAAAAAATTCATGAAGCAATTGAGGCATGGAAATTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTTTCAGATCACTAAATCATTGTCGAATCCAAGGCAAAGGAAAATTTTTCACTTCTGCGCCTATGCTTTTTATTTGGATTTCCAGTCATCTAAGGTG
TCCTAATAATTTTAAATATTCTTAGATAAAATTCAGTAGTCTGTGGAATAATACAAGAAACACTATCAGAGAATTCAATAGTGCACATTGGGATCCAAGTTGTCC
AAAATTTGAAATTTTGATGCATTTTTTCAGCCATTTAACGACAGTGAAAGTAGTTTAGAGAGCTTCTTGGGTGCTCACAAGTCCTTTGACATATAGTTGTGGAAA
ATTGACTTTTATCCCACTGTTAGGCCTATGAGAGGAATTGCTTATTCTCTTCTTTTGGTACTACGTCAATCATGGTCAAAACAATTCGCGCCAATTATATGTGGG
CTAGAGGTTTGGAAATTCTCATATGAGTCAGACGTGGCAAATAAAAAAAAATTCATGAAGCAATTGAGGCATGGAAATTCGTAGAGAAAATGAAGAGTTTGCGAC
CTTGTGAGAAAGTTTTAGTTCCAAGCATAGTATTGAAGAAAAATCATGACGATAGAGAAAGGGATTTGAAGCGGTTAAGAGAAATGAATTGTGTTTTGGCAATAG
AGAAAGAAAAGTTGAGTGAAGAAGTCAAGAGATAGTTCAACAAGTTGTTAGTGCTCAAAGAGATTTGGATAAGGCAAAACGAAGTCAATCAGAGCTGGAGAAGAA
TAACAATTCTTTAAACACTGAAGCAATCCAAGTGAGAAAAAAGAATAAGAGATTATTAAGGAACATTTCCAACTTGCATGAAGAGAACATAAGCTAAAAAGGAAC
AAGTACGACATAATGAGACGCAAGTATGATGGTGCTAGAGGTCACACGGAACAAGGAGTTCAGAAATTAAGACAAATGATGAGGATGACAAATTAATTTTTAGTG
TAGGCTACGATTCTTCGACAAGGCATTATACCAACACACGACACAAACAGAGAATTGTCTCATTTTCTTGGAATCATAGGGCCTTGGACATTTTGGATTCTACCA
TTAG
Protein sequenceShow/hide protein sequence
MRGIAYSLLLVLRQSWSKQFAPIICGLEVWKFSYESDVANKKKFMKQLRHGNS