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MELO3C030086 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030086
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionU11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1
Genome locationchr03:7671285..7673308
RNA-Seq ExpressionMELO3C030086
SyntenyMELO3C030086
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037113.1 hypothetical protein E6C27_scaffold379G00140 [Cucumis melo var. makuwa]9.3e-1389.58Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSLSTM
        V EEERQALAAAD +A KDAIAT+EVSRKTIPTYPESRNPIFKSLSTM
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSLSTM

KAA0048935.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis melo var. makuwa]1.4e-0887.5Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNP
        V EEERQALAAADT+AAKDAIAT EVSRKT+PTYPESR+P
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNP

KAA0053480.1 Programmed cell death protein 7 [Cucumis melo var. makuwa]5.6e-1088.89Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSL
        V EEERQALAAADT+AAK AIAT EVSRKTIPTY ESRNPIFKSL
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSL

KAA0062676.1 hypothetical protein E6C27_scaffold1576G00020 [Cucumis melo var. makuwa]1.7e-1185.42Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSLSTM
        V EEE Q LAAADT+AAKD IAT EVSRKTIPTYPESRNPIFKS+STM
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSLSTM

XP_016899131.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucumis melo]1.4e-0887.5Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNP
        V EEERQALAAADT+AAKDAIAT EVSRKT+PTYPESR+P
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNP

TrEMBL top hitse value%identityAlignment
A0A5A7U5M4 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X16.7e-0987.5Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNP
        V EEERQALAAADT+AAKDAIAT EVSRKT+PTYPESR+P
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNP

A0A5D3CB94 Uncharacterized protein8.5e-1285.42Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSLSTM
        V EEE Q LAAADT+AAKD IAT EVSRKTIPTYPESRNPIFKS+STM
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSLSTM

A0A5D3CQ23 Uncharacterized protein4.5e-1389.58Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSLSTM
        V EEERQALAAAD +A KDAIAT+EVSRKTIPTYPESRNPIFKSLSTM
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSLSTM

A0A5D3D0C0 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X16.7e-0987.5Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNP
        V EEERQALAAADT+AAKDAIAT EVSRKT+PTYPESR+P
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNP

A0A5D3DWL4 Programmed cell death protein 72.7e-1088.89Show/hide
Query:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSL
        V EEERQALAAADT+AAK AIAT EVSRKTIPTY ESRNPIFKSL
Subjt:  VHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPIFKSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATCGACTGGCGGCTAGAGAGACGCGGGTCGGCTTCCGATCCGCGAAGAGTGGTGGCTGGAGAGACGCACGATGAAGCACAACGGCTCGGATGGGTG
GCGATTGGCTCGGGCTACCGGCTCGGGTTGATCTACGACGAACGCCCGACAGCGACGATTGGCGGAGAAGGGAGGGGCGGCGGCGGCGTTCATGAAGAGGAACGT
CAAGCCCTTGCTGCAGCTGATACAAATGCTGCCAAGGATGCCATTGCTACTGTTGAGGTCTCTAGGAAGACTATTCCAACTTACCCTGAATCAAGGAATCCAATA
TTTAAGTCTTTATCAACTATG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAATCGACTGGCGGCTAGAGAGACGCGGGTCGGCTTCCGATCCGCGAAGAGTGGTGGCTGGAGAGACGCACGATGAAGCACAACGGCTCGGATGGGTG
GCGATTGGCTCGGGCTACCGGCTCGGGTTGATCTACGACGAACGCCCGACAGCGACGATTGGCGGAGAAGGGAGGGGCGGCGGCGGCGTTCATGAAGAGGAACGT
CAAGCCCTTGCTGCAGCTGATACAAATGCTGCCAAGGATGCCATTGCTACTGTTGAGGTCTCTAGGAAGACTATTCCAACTTACCCTGAATCAAGGAATCCAATA
TTTAAGTCTTTATCAACTATG
Protein sequenceShow/hide protein sequence
MEEIDWRLERRGSASDPRRVVAGETHDEAQRLGWVAIGSGYRLGLIYDERPTATIGGEGRGGGGVHEEERQALAAADTNAAKDAIATVEVSRKTIPTYPESRNPI
FKSLSTM